PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc06679.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 356aa MW: 38580.9 Da PI: 10.5961 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.5 | 1.8e-14 | 317 | 356 | 2 | 45 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAaka 45 y+GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a Zmw_sc06679.1.g00010.1.am.mk 317 TYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFATAEMAARA 356 69****998.**********843...6***************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 17.886 | 317 | 356 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.63E-13 | 317 | 356 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.1E-8 | 317 | 356 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 9.3E-21 | 317 | 356 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 6.3E-12 | 317 | 356 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 6.93E-18 | 318 | 356 | No hit | No description |
PRINTS | PR00367 | 2.7E-10 | 318 | 329 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.7E-10 | 340 | 356 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 356 aa Download sequence Send to blast |
MEDKVRWGGE GRKKVQFGAA VECTTESGVP VVARPAKIAR DRPSLADRQH MRVRSTTILT 60 CDREIESDGV DLRYISPEAW RLRRTTTCTA NEQSVERKLN ELHATIDCYD PNKSNPTERA 120 SELAGSSAYS KRRYETRGRV GRAESEARAK GHGRHHGGVE TNTHGAGASS WHAWPFGPSR 180 TTRLRRRSSV RSNPAGLPAA LHWGRGPCSS IAPVDLRETV DGDPCRKSPT APLVSSAHCH 240 TPPSSALLLT NSTTNTNTSS AAMAMDDPSS GSETTTSSSA EAPASPTATA TSASSSDAAA 300 EGVGKKKRRR SDGHHPTYRG VRMRAWGKWV SEIREPRKKS RIWLGTFATA EMAARA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 304 | 309 | KKKRRR |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP159 | 35 | 354 |