PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc06679.1.g00010.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 356aa    MW: 38580.9 Da    PI: 10.5961
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc06679.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.51.8e-14317356245
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAaka 45 
                                    y+GVr +  +g+Wv+eIr+p++   + r++lg+f tae+Aa+a
  Zmw_sc06679.1.g00010.1.am.mk 317 TYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFATAEMAARA 356
                                   69****998.**********843...6***************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.886317356IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-13317356IPR016177DNA-binding domain
PfamPF008471.1E-8317356IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.3E-21317356IPR001471AP2/ERF domain
SMARTSM003806.3E-12317356IPR001471AP2/ERF domain
CDDcd000186.93E-18318356No hitNo description
PRINTSPR003672.7E-10318329IPR001471AP2/ERF domain
PRINTSPR003672.7E-10340356IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MEDKVRWGGE GRKKVQFGAA VECTTESGVP VVARPAKIAR DRPSLADRQH MRVRSTTILT  60
CDREIESDGV DLRYISPEAW RLRRTTTCTA NEQSVERKLN ELHATIDCYD PNKSNPTERA  120
SELAGSSAYS KRRYETRGRV GRAESEARAK GHGRHHGGVE TNTHGAGASS WHAWPFGPSR  180
TTRLRRRSSV RSNPAGLPAA LHWGRGPCSS IAPVDLRETV DGDPCRKSPT APLVSSAHCH  240
TPPSSALLLT NSTTNTNTSS AAMAMDDPSS GSETTTSSSA EAPASPTATA TSASSSDAAA  300
EGVGKKKRRR SDGHHPTYRG VRMRAWGKWV SEIREPRKKS RIWLGTFATA EMAARA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1304309KKKRRR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354