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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc06524.1.g00050.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
MYB |
Protein Properties |
Length: 270aa MW: 29358.9 Da PI: 10.0767 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc06524.1.g00050.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 53.2 | 6.9e-17 | 27 | 74 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+W++eEdell + v++ G g+W+t +r+ g+ R++k+c++rw +yl
Zmw_sc06524.1.g00050.1.sm.mk 27 RGPWSPEEDELLSRFVAREGEGRWRTLPRRAGLLRCGKSCRLRWMNYL 74
89******************************99************97 PP
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2 | Myb_DNA-binding | 43.1 | 1e-13 | 81 | 139 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT.............-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.............tWktIartmgkgRtlkqcksrwqkyl 48
g+ ++E++l+++++++lG++ +W++Ia +++ gRt++++k++w+++l
Zmw_sc06524.1.g00050.1.sm.mk 81 GPIAADEEDLILRLHRLLGNRfilarvrartrarRWSLIAGRLP-GRTDNEIKNYWNSHL 139
566689**************************************.************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010090 | Biological Process | trichome morphogenesis |
GO:0010468 | Biological Process | regulation of gene expression |
GO:0048354 | Biological Process | mucilage biosynthetic process involved in seed coat development |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 270 aa
Download sequence Send
to blast |
MTRKQPAAVV RRRGGGGGAA AVAALKRGPW SPEEDELLSR FVAREGEGRW RTLPRRAGLL 60 RCGKSCRLRW MNYLRPDIKR GPIAADEEDL ILRLHRLLGN RFILARVRAR TRARRWSLIA 120 GRLPGRTDNE IKNYWNSHLS KKLLAQGIDP RTHRPLHAAH NSNSNANSKK PCVSPPPPSA 180 STSGAGVAGE DGGSDFAAAM GLDADGFNGF GDEFRACWDA PCAGFDLGFA TVDDATFSSF 240 LDSLISEDQF VDYFGDHNNA SGGKDQGSAS
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator, when associated with BHLH002/EGL3/MYC146, BHLH012/MYC1 or BHLH042/TT8. {ECO:0000269|PubMed:15361138}. |