PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc06498.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 445aa MW: 49681.3 Da PI: 10.9179 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.5 | 2.5e-16 | 10 | 59 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr +k +g+WvAeIr+p + r+r++lg++ t+ Aa+a++ a +l+g Zmw_sc06498.1.g00010.1.am.mk 10 QYRGVRMRK-WGKWVAEIREPHK---RTRIWLGSYATPVAAARAYDTAVFYLRG 59 69*****99.**********732...5*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 6.4E-30 | 9 | 68 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.589 | 10 | 67 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.4E-21 | 10 | 69 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 7.9E-36 | 10 | 73 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 6.8E-10 | 10 | 59 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.7E-11 | 11 | 22 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 4.94E-25 | 13 | 68 | No hit | No description |
PRINTS | PR00367 | 1.7E-11 | 49 | 69 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 445 aa Download sequence Send to blast |
QHQQQQPRRQ YRGVRMRKWG KWVAEIREPH KRTRIWLGSY ATPVAAARAY DTAVFYLRGR 60 SARLNFPDEI PALALSEGGD ADGGTLSAAS IRKKAIEVGS RVDALQTGMM VAPPPHHCER 120 PRHNHHHHHQ HRELQLLGDE HHQHEQKPPP QQPRAAWSGR AKNPDLNRAP SPESSDADMP 180 FPSPRMIQHN QPPAGSIPST YSVGGRFFDT TSGWPWPAGR RTTSPFLLGV IHGVVCKQDR 240 GKVRRTQSCM MGTAFLLTVL DDAPAAVRAC RPFISCTGIW PCVAMMGWER IGRRNDNSSR 300 SSDMCAGPGA RLVVAQFMNE HMPGVMQNMD RRSRERDDRG AIPSSLCAPR FFHSHPELVP 360 RCTRPDKPCL VGSLAEEREG GRRHAAVLSG HQLRLSQPFL ASSSPPHRPS KSPTKRAKAS 420 SDGWVRLLPR SRNEMGRETT AQDSD |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 1e-13 | 10 | 70 | 14 | 75 | Ethylene-responsive transcription factor ERF096 |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00276 | DAP | Transfer from AT2G23340 | Download |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3943 | 30 | 75 |