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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc06470.1.g00030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 622aa MW: 69842 Da PI: 11.8011 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156.7 | 9.5e-49 | 377 | 525 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk........................kvkaeeke 57 lppGfrFhPtdeelv++yL+++++g ++ + ++ike+d+yk++Pw+Lp+ ++ +eke Zmw_sc06470.1.g00030.1.am.mk 377 LPPGFRFHPTDEELVMHYLCRRCTGMPIAV-SIIKEIDLYKFDPWQLPStsfvlaaleflgslpelyenfsdrMALYGEKE 456 79**************************99.89***************5589*********9999988877753333899* PP NAM 58 wyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 wyfFs+rd+ky++g+r+nra+ sgyWkatg dk+v + + v +kk Lvfy+g+apkgekt+W+mheyrl Zmw_sc06470.1.g00030.1.am.mk 457 WYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGT--PKPVAIKKALVFYTGKAPKGEKTNWIMHEYRL 525 ***********************************98..789***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.32E-50 | 374 | 528 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 51.897 | 377 | 545 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.8E-25 | 378 | 525 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 622 aa Download sequence Send to blast |
MSTLLTELPL ASYEHSLLTG PRTARTQPNR SRSLGLGASR SIHATSNDSV SGPTTRAQCR 60 RLYRIRENSR VRDTGDRRAR ETAGAPSFSS PAVHAFGLYL PRRAVQAATW PRPSVRSRAQ 120 SRCHLDWRTS SVRLVLGLSW SREAYLQAFV RTFHGFSSSP VVFAVRSTPA NSFHRLLLHI 180 LLTQCRLIII RHLALARSGQ VILIHQPHAA PAHLALIART HPYFRGRRYT AGRTHVSRRH 240 RNGDAARRPC GPLRGRFPKA VRPTPAARRG PSLSLLCYRR AAAARARPSK KPDVSSDRIG 300 AFAWRRRGST GQSAAPRVRY RGGRAARATR VAVAKLYKCP APHQPPSHRA RESKDSEIRK 360 GGASTMSYGG GGQDLHLPPG FRFHPTDEEL VMHYLCRRCT GMPIAVSIIK EIDLYKFDPW 420 QLPSTSFVLA ALEFLGSLPE LYENFSDRMA LYGEKEWYFF SPRDRKYPNG SRPNRAAGSG 480 YWKATGADKP VGTPKPVAIK KALVFYTGKA PKGEKTNWIM HEYRLADVDR SARKKNSLRA 540 RVALSFGPLK NYRHGPCYRP EQGGLHSPND SDGCRRHDPK CESTRCHSPW PPAANHCRAS 600 PMRRRRPRWL VLSWSRGVLV QD |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3swm_A | 2e-58 | 375 | 530 | 18 | 150 | NAC domain-containing protein 19 |
3swm_B | 2e-58 | 375 | 530 | 18 | 150 | NAC domain-containing protein 19 |
3swm_C | 2e-58 | 375 | 530 | 18 | 150 | NAC domain-containing protein 19 |
3swm_D | 2e-58 | 375 | 530 | 18 | 150 | NAC domain-containing protein 19 |
3swp_A | 2e-58 | 375 | 530 | 18 | 150 | NAC domain-containing protein 19 |
3swp_B | 2e-58 | 375 | 530 | 18 | 150 | NAC domain-containing protein 19 |
3swp_C | 2e-58 | 375 | 530 | 18 | 150 | NAC domain-containing protein 19 |
3swp_D | 2e-58 | 375 | 530 | 18 | 150 | NAC domain-containing protein 19 |