PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc06259.1.g00020.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 408aa    MW: 43159 Da    PI: 8.8154
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc06259.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.71.2e-28160213759
                                   EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   7 WrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  Zmw_sc06259.1.g00020.1.am.mk 160 WRKYGQKMAKGNPCPRAYYRCTMAnGCPVRKQVQRCAEDRSILITTYEGTHNHP 213
                                   ***********************999***************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.5E-29146215IPR003657WRKY domain
PROSITE profilePS5081127.703149215IPR003657WRKY domain
SuperFamilySSF1182903.14E-25154215IPR003657WRKY domain
PfamPF031065.6E-25160213IPR003657WRKY domain
SMARTSM007744.9E-30160214IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MRSELGRMND ENQRLRGMVT QVTTNYQALQ MHLVTLTQQR AGQTQPPPAT TTQQLQHHQQ  60
QDGIMPRPFL DLVPRSSGGD GAEELSNSST EAGSPRRSSS TGNNKLGERG ESPSKVGWLP  120
EGRQQQDKVH HEQEQQQQAQ EATMRKARVS VRARSEAPIW RKYGQKMAKG NPCPRAYYRC  180
TMANGCPVRK QVQRCAEDRS ILITTYEGTH NHPLPPAAMA MASTTSAAAS MLLSGSMPSA  240
DGGVASNFLA RTVLPCSSSM ATISASAPFP TVTLDLTNGP PNATMPLSAA CPPQFQMPLP  300
GGGAAPAFTV PPHVLYNQSR FSGLQMSSPS SGAHVDPASR DDPSSLADTV SAAAAAITAD  360
PNFTVALAAA ITSIIGGGAA AGNNNNNNNA TTTRSNNTTS NNTNSETH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-191602172076WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00428DAPTransfer from AT4G04450Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015622142.11e-160probable WRKY transcription factor 31 isoform X2
SwissprotQ9XEC31e-102WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A140F5851e-165A0A140F585_9POAL; WAKY 1 protein
STRINGOPUNC01G09130.11e-163(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP52653656