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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc06246.1.g00040.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
ERF |
Protein Properties |
Length: 380aa MW: 40795.8 Da PI: 9.5977 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc06246.1.g00040.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.4 | 4.7e-20 | 209 | 258 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++a+ +l+g
Zmw_sc06246.1.g00040.1.am.mk 209 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEDAALAYDKAAFRLRG 258
59******9.**********965...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 380 aa
Download sequence Send
to blast |
MLAWLRVHGP GLALLYKALA GRPLLPQRDA STHPRPPTTK NTTKPPATSR STPRTHQIPS 60 ASDQELMKAL EPFITSVSSS SSSSPYNYYS SPSSSITQDS FMSTPSYTSL ATPPLPTTDA 120 TSSSSFSQLP PLYSSPYAGQ ATPSMTGPMG LTHLSPAQIQ QIQAQFLLQQ QQQRGLHAAF 180 LGPRVQPMKQ SGSPPRGALA AAGAAQSKLY RGVRQRHWGK WVAEIRLPKN RTRLWLGTFD 240 TAEDAALAYD KAAFRLRGDM ARLNFPSLRR GGAHLAGPLH ASIDAKLTSI CQSLAGASSS 300 KNGSPASDSA ASSPESPKCS ASTEEEEESV SAGSPPSPTL APPVPEMAKL DFTEAPWDET 360 EAFHLRKYPS WEIDWDSILS
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Publications
? help Back to Top |
- Pati A,Vasquez-Robinet C,Heath LS,Grene R,Murali TM
XcisClique: analysis of regulatory bicliques. BMC Bioinformatics, 2006. 7: p. 218 [PMID:16630346] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Iwase A, et al.
WIND1-based acquisition of regeneration competency in Arabidopsis and rapeseed. J. Plant Res., 2015. 128(3): p. 389-97 [PMID:25810222] - Ikeuchi M, et al.
PRC2 represses dedifferentiation of mature somatic cells in Arabidopsis. Nat Plants, 2015. 1: p. 15089 [PMID:27250255] - Iwase A, et al.
WIND1 Promotes Shoot Regeneration through Transcriptional Activation of ENHANCER OF SHOOT REGENERATION1 in Arabidopsis. Plant Cell, 2017. 29(1): p. 54-69 [PMID:28011694]
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