PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zmw_sc06241.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 288aa MW: 30419.3 Da PI: 9.6505

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc06241.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	89.5	2.8e-28	170	227	4	61
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + l+cprC s++tkfCy+nny++ qPr++C+aC ryWt+GGalr v ++ r++ +s Zmw_sc06241.1.g00030.1.am.mk 170 EPLPCPRCGSRETKFCYFNNYNVRQPRHLCRACSRYWTAGGALRCVTTASSGRRRPRS 227 5789******************************************988766665444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-19	170	213	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	5.9E-25	171	224	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	25.024	172	226	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	174	210	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence Send to blast
MGKGVQREGI NVMRTQGKRE AMSTPQTRGT RTKQDAFPWD RELVDSADPH KNLDQHDTSR 60 DQSMIIHDKA APTKVKRLYM LHRGGVPNDA SLLPFGSMDA DAAGFKLFGK VIQPPDAHQR 120 TAEESVATPP PPPPPPPESM TPSQTLPTLP PSLPAAAAAA APSAAGGTGE PLPCPRCGSR 180 ETKFCYFNNY NVRQPRHLCR ACSRYWTAGG ALRCVTTASS GRRRPRSSAA RSASAAADAV 240 AASASSASAA DERGARACVT QCRPILPHAS ATGRPACGPA EPSCPFST

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
STRING	Sb03g030850.1	2e-39	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP14716	16	20