PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc05704.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 282aa MW: 30932 Da PI: 10.6392

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc05704.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	84.2	1.8e-26	74	168	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfsk 82 +f r+wse+De+ +LqGl+ + +g d++ fy+ +++s+ +++sql+eK+rrLK+Kf+ +++++++g +p+ + Zmw_sc05704.1.g00010.1.sm.mk 74 KFPRIWSESDELRFLQGLLGC-GAQGLVFPRDLNVFYDRFSESMPQPYTRSQLSEKLRRLKNKFRSMSARVAKGLDPARLA 153 699****************.556878888********************************************** PP DUF573 83 ehdqkifelskkiWg 97 +hd+++++l++++W+ Zmw_sc05704.1.g00010.1.sm.mk 154 PHDRDVLHLCSRLWD 168 ************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	3.1E-24	75	168	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence Send to blast
MASDDQQTLP VPVPVPVPPN PTATPTAPAD PTAPSGARKL PIKRRSPRPS SSSPPSSGSD 60 QQQGQEQEPQ PPFKFPRIWS ESDELRFLQG LLGCGAQGLV FPRDLNVFYD RFSESMPQPY 120 TRSQLSEKLR RLKNKFRSMS ARVAKGLDPA RLAPHDRDVL HLCSRLWDPA NAATSPFAAS 180 AGTGASGNRR RRANPHGTLH EHRMANAVLD VFEECLREAK ANGIFRGGNA KGSASESELT 240 KRWRAQRMDE LDVLNRRLRL LVEDTAAAGI INMATSVGIG IW

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001143574.2	2e-82	uncharacterized protein LOC100276272
TrEMBL	A0A2S3IIY7	1e-112	A0A2S3IIY7_9POAL; Uncharacterized protein
TrEMBL	A0A2T7C225	1e-112	A0A2T7C225_9POAL; Uncharacterized protein
STRING	GRMZM2G041818_P01	8e-82	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP8695	32	43