PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc05677.1.g00020.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 733aa    MW: 77818.1 Da    PI: 10.1746
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc05677.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY871.6e-27559617259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +Dg++WrKYGqK+ kg+++pr+YYrCt a +Cpv+kk++r+a+d +v++ tY g Hnh+
  Zmw_sc05677.1.g00020.1.am.mk 559 NDGCQWRKYGQKVAKGNPCPRAYYRCTGApDCPVRKKLQRCAQDASVLVSTYDGVHNHP 617
                                   8**************************999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF511826.45E-2972243IPR011051RmlC-like cupin domain
PfamPF078471.3E-5387263IPR012864Cysteine oxygenase/2-aminoethanethiol dioxygenase
Gene3DG3DSA:2.60.120.101.1E-11115242IPR014710RmlC-like jelly roll fold
Gene3DG3DSA:2.20.25.801.2E-27546617IPR003657WRKY domain
SuperFamilySSF1182905.36E-24551618IPR003657WRKY domain
PROSITE profilePS5081125.373553619IPR003657WRKY domain
SMARTSM007745.0E-32558618IPR003657WRKY domain
PfamPF031063.5E-23559617IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0055114Biological Processoxidation-reduction process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016702Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 733 aa     Download sequence    Send to blast
MRYMALEPSD EVLYERTVVS ATAMPIGGRK MAATPASAVS SPKQSHRRRR TGAVQTIYDV  60
SRDVFAAAAT PGFQPLPNDV ARLSAFLNGL TLQDIGLDAS IPYLRAAPDG GRPRVTYLHF  120
ADTPTFSFGV FCLPQSAVIP LHDHPGMTVF SKILLGSMHI QSYDWVTTPT PAGGPRATRT  180
SAGARLAKLH TDAAFDASSE TVVLYPETGG NLHRFTATAP CVVLDVMGPP YCQAEGRDCA  240
YYGAKATRGA GEDNGQYAWL KPVRRTFELD SFHLRPTIRK PRAGGRSKRA DGRPAKAAPA  300
GNPSSHPAGD QSGHVSMFTN PSPAGYLNCR VPIKPVFFNQ VFGDRGSSRV RGRRQAARRL  360
RVQKGEEKWV VSLMEMKTRV LEVMRDAEKG SDRHLQAPRI DASEEHFRRV RNEAERRHRI  420
GFPQLGDGPA STLPCRDGTG DERPPGSFLA LSLGATTNDP LRASLPAKRG EEASSAVISL  480
GLGLGLRSSS DGGGDETVIG ARRQRTSDSG NGAGDVPSAV AAGPGRYREV GRGKNASLPP  540
PTRPGRVSFR TRCSAPTIND GCQWRKYGQK VAKGNPCPRA YYRCTGAPDC PVRKKLQRCA  600
QDASVLVSTY DGVHNHPLTP YAAAMASAMA AAADSSSSAP LVLPSSSSSF SSAPLRAVPV  660
AMPPPQSYYA AATGSGVTVP GAATSSRNPM AGIVEKAVAD PKFRAAVMAA VASYVGEQCG  720
GKISELLTLA PPC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-18545618476Probable WRKY transcription factor 4
2lex_A2e-18545618476Probable WRKY transcription factor 4
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP143192226