PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc05666.1.g00030.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 116aa    MW: 13162.4 Da    PI: 6.538
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc05666.1.g00030.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.84.2e-211062156
                           AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                                  ++y+GVr+++ +g+++AeIrd      +++r++lg+f+taeeAa+a+++a+ +++g+
  Zmw_sc05666.1.g00030.1.sm.mk 10 TKYRGVRRRP-SGKFAAEIRDS---SrQSARVWLGTFDTAEEAARAYDRAAYAMRGH 62
                                  69********.7*********3...2236**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.15E-181069No hitNo description
PfamPF008475.6E-171062IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-301169IPR001471AP2/ERF domain
SMARTSM003804.9E-321175IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-231169IPR016177DNA-binding domain
PROSITE profilePS5103222.9721169IPR001471AP2/ERF domain
PRINTSPR003672.4E-101223IPR001471AP2/ERF domain
PRINTSPR003672.4E-103551IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    Send to blast
MDDDQGKDDT KYRGVRRRPS GKFAAEIRDS SRQSARVWLG TFDTAEEAAR AYDRAAYAMR  60
GHLAMLNFPG EAHNYVRGSS SSSSRQQQQQ QQVIELEYLD DQVLQEMLKG DDGSKK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-3361039114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020193660.19e-54ethylene-responsive transcription factor 14-like
SwissprotQ9LTC51e-36ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A2T7DAY52e-55A0A2T7DAY5_9POAL; Uncharacterized protein
STRINGEMT069209e-53(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]