PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc05662.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Nin-like

Protein Properties

Length: 383aa MW: 42398.5 Da PI: 11.2735

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc05662.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	58.6	1.2e-18	49	88	9	48
RWP-RK 9 dlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 +++ +F+l i+dAA eLg+c++ LKriCR +G++RWP R Zmw_sc05662.1.g00020.1.am.mk 49 EIRTHFHLRIEDAAAELGICQSSLKRICRSHGVPRWPGRM 88 799**********************************996 PP
2	RWP-RK	40.4	5.7e-13	120	159	13	52
RWP-RK 13 yFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 F+l i+dAA e +c++ LK iC ++G++RWP k+++l Zmw_sc05662.1.g00020.1.am.mk 120 RFHLRIEDAATEQCICQSSLKSICHKHGVPRWPGTKLSKL 159 7*********************************999986 PP
3	RWP-RK	29.7	1.3e-09	292	323	14	45
RWP-RK 14 FslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 +l ++dAA+ Lg+++ LK CR +G+ RWP Zmw_sc05662.1.g00020.1.am.mk 292 LHLRLNDAASALGISTDRLKFVCRSNGLCRWP 323 6999**************************** PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	13.833	25	112	IPR003035	RWP-RK domain
Pfam	PF02042	5.0E-18	49	88	IPR003035	RWP-RK domain
Pfam	PF02042	4.6E-12	120	159	IPR003035	RWP-RK domain
PROSITE profile	PS51519	11.138	266	356	IPR003035	RWP-RK domain
Pfam	PF02042	4.7E-8	290	323	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence Send to blast
MEVLMAAAAR GRTERKRLGF RKEPQKIPCK VAGEVKRFWG STACPQWPEI RTHFHLRIED 60 AAAELGICQS SLKRICRSHG VPRWPGRMVW FRLEQLSKLA MEAMARLGAA PGEDSGHRPR 120 FHLRIEDAAT EQCICQSSLK SICHKHGVPR WPGTKLSKLA MEAMGRQREQ HQGKKVGIVV 180 RKWSPRASAR FLMRSLGFFS SQMLPQYCRN KAVLVQVQLS KSPQAMVDCP PKKSVAVVLG 240 YLKARMRDTG QPTLCQATWP PPSTEKKATL VVLTMPRRRA ASPPWSEVLG VLHLRLNDAA 300 SALGISTDRL KFVCRSNGLC RWPGMTVRMN ASIRSGDSLN AKLRRLIQEA ALARAEASSI 360 AMVASPSSSS PGNDHAGGQK GDS

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence Send to blast

MEVLMAAAAR GRTERKRLGF RKEPQKIPCK VAGEVKRFWG STACPQWPEI RTHFHLRIED  60
AAAELGICQS SLKRICRSHG VPRWPGRMVW FRLEQLSKLA MEAMARLGAA PGEDSGHRPR  120
FHLRIEDAAT EQCICQSSLK SICHKHGVPR WPGTKLSKLA MEAMGRQREQ HQGKKVGIVV  180
RKWSPRASAR FLMRSLGFFS SQMLPQYCRN KAVLVQVQLS KSPQAMVDCP PKKSVAVVLG  240
YLKARMRDTG QPTLCQATWP PPSTEKKATL VVLTMPRRRA ASPPWSEVLG VLHLRLNDAA  300
SALGISTDRL KFVCRSNGLC RWPGMTVRMN ASIRSGDSLN AKLRRLIQEA ALARAEASSI  360
AMVASPSSSS PGNDHAGGQK GDS

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP47126	3	3