PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc05576.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

MYB_related

Protein Properties

Length: 472aa MW: 50250.2 Da PI: 8.7891

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc05576.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.2	3.9e-08	1	23	24	47
HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqky 47 W+tIa ++ gRt++++k++w+++ Zmw_sc05576.1.g00050.1.am.mk 1 WSTIATHLE-GRTDNEIKNYWNTH 23 *******.**********97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.6E-11	1	40	IPR009057	Homeodomain-like
CDD	cd00167	2.39E-5	1	24	No hit	No description
PROSITE profile	PS51294	16.884	1	28	IPR017930	Myb domain
SuperFamily	SSF46689	1.71E-6	1	32	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence Send to blast
WSTIATHLEG RTDNEIKNYW NTHIRKKLVR MGVDPVTHQR LPPDDILNGA LASPGGLPGT 60 LLCAAASSFR DLDTALRQAQ ALQLLLQVVG SSSNLTGSAA LLGNYNLPTG NAMLSNVNNS 120 VAPNLRDQTM SIFSPANNRP AAGYYPPCDA GAANFAEQGM AQQCLKSSAP SPSCGSPNGE 180 LAADQYCNTT AALERPAAYT QEAAATGVDL PVPVQTFTDL LEPREMPNLT SASAPADRVL 240 AAHAGGWAEG ERGAWEGDDG WCSPLTLAGA AVHARSSGTA PRRRRCQANR PLPARAKWFS 300 EVFKMGHAMG RRWVMPMVGL GDRWVVPSGS IEGPGDGDFS RLVKDGTVTA CVCVPLAVKG 360 VARHGLKFCR QKGSRCSKFQ LGGSVEIQDL TFKYIYHVKA GAAVTKRHAA IIPLVIVGSA 420 IWMSAPRGAS LVLVTGHKLL FMRGSNELPA EIHGWSTDHG HAKRRDEAFL TC

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence Send to blast

WSTIATHLEG RTDNEIKNYW NTHIRKKLVR MGVDPVTHQR LPPDDILNGA LASPGGLPGT  60
LLCAAASSFR DLDTALRQAQ ALQLLLQVVG SSSNLTGSAA LLGNYNLPTG NAMLSNVNNS  120
VAPNLRDQTM SIFSPANNRP AAGYYPPCDA GAANFAEQGM AQQCLKSSAP SPSCGSPNGE  180
LAADQYCNTT AALERPAAYT QEAAATGVDL PVPVQTFTDL LEPREMPNLT SASAPADRVL  240
AAHAGGWAEG ERGAWEGDDG WCSPLTLAGA AVHARSSGTA PRRRRCQANR PLPARAKWFS  300
EVFKMGHAMG RRWVMPMVGL GDRWVVPSGS IEGPGDGDFS RLVKDGTVTA CVCVPLAVKG  360
VARHGLKFCR QKGSRCSKFQ LGGSVEIQDL TFKYIYHVKA GAAVTKRHAA IIPLVIVGSA  420
IWMSAPRGAS LVLVTGHKLL FMRGSNELPA EIHGWSTDHG HAKRRDEAFL TC

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6265	29	55