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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc05572.1.g00020.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
MYB |
Protein Properties |
Length: 310aa MW: 34112 Da PI: 5.0892 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc05572.1.g00020.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 63.6 | 3.8e-20 | 24 | 71 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT+eEd llv++v+++G g+W++ ar g++Rt+k+c++rw++yl
Zmw_sc05572.1.g00020.1.sm.mk 24 RGPWTAEEDVLLVNYVAKHGEGRWNSLARSAGLKRTGKSCRLRWLNYL 71
89********************************************97 PP
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2 | Myb_DNA-binding | 42.4 | 1.7e-13 | 77 | 121 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg T+ E++l++++++++G++ W+ Iar++ gRt++++k++w++
Zmw_sc05572.1.g00020.1.sm.mk 77 RGDITPAEQLLILELHARWGNR-WSEIARRLLPGRTDNEVKNYWRT 121
6778******************.*******999***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MVDQALAMSP AASVVSEDKG ELRRGPWTAE EDVLLVNYVA KHGEGRWNSL ARSAGLKRTG 60 KSCRLRWLNY LRPDVRRGDI TPAEQLLILE LHARWGNRWS EIARRLLPGR TDNEVKNYWR 120 TRVQRHAKRL RCDVSSRRFQ DVVRQVWVPR LVQRVQAESS SAATVGCRGG HNVAAPEATS 180 VMSAAAACQL MIGAYSHPHY QQLDCCYTEP SQTTATTAGA MSPDDASSPP WSSLTTEAST 240 NQGGDVVQCS GATTGPVDGD DVAQEEEDVF GGSWSELLAT TGPDDGAMIG MRDFELGDFE 300 DNLWSLEDIF
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in abiotic stress responses. Plays a regulatory role in tolerance to salt, cold, and drought stresses. Regulates positively the expression of genes involved in proline synthesis and transport, and genes involved in reactive oxygen species (ROS) scavenging such as peroxidase, superoxide dismutase and catalase during salt stress. Transactivates stress-related genes, including LEA3, RAB16A and DREB2A during salt stress. {ECO:0000269|PubMed:22301384}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by salt, cold and osmotic stresses, and abscisic acid (ABA). Down-regulated by salicylic acid (SA). {ECO:0000269|PubMed:22301384}. |
Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] - Yang A,Dai X,Zhang WH
A R2R3-type MYB gene, OsMYB2, is involved in salt, cold, and dehydration tolerance in rice. J. Exp. Bot., 2012. 63(7): p. 2541-56 [PMID:22301384] - Chen X, et al.
The NAC family transcription factor OsNAP confers abiotic stress response through the ABA pathway. Plant Cell Physiol., 2014. 55(3): p. 604-19 [PMID:24399239] - Lv Y, et al.
New insights into the genetic basis of natural chilling and cold shock tolerance in rice by genome-wide association analysis. Plant Cell Environ., 2016. 39(3): p. 556-70 [PMID:26381647] - Hong Y,Zhang H,Huang L,Li D,Song F
Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]
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