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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc05510.1.g00010.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
MYB |
Protein Properties |
Length: 226aa MW: 24654.4 Da PI: 10.8982 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc05510.1.g00010.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 60.4 | 4e-19 | 12 | 57 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEde l ++v+++G ++W++I r ++ gR++k+c++rw +
Zmw_sc05510.1.g00010.1.am.mk 12 KGPWSPEEDEALRRLVERHGARNWTAIGRGIP-GRSGKSCRLRWCNQ 57
79******************************.***********985 PP
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2 | Myb_DNA-binding | 55.4 | 1.5e-17 | 64 | 107 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
r ++T+eEd +++a+++lG++ W++Iar ++ gRt++ +k++w++
Zmw_sc05510.1.g00010.1.am.mk 64 RRPFTAEEDAAILRAHARLGNR-WAAIARLLP-GRTDNAVKNHWNS 107
679*******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 226 aa
Download sequence Send
to blast |
MAGAEAECDR IKGPWSPEED EALRRLVERH GARNWTAIGR GIPGRSGKSC RLRWCNQLSP 60 QVERRPFTAE EDAAILRAHA RLGNRWAAIA RLLPGRTDNA VKNHWNSSLK RKLPTATNNA 120 EAERPCKRVS PAPGSPTGSS DRSELSHGSV GGGGAQVFRP VPRPGWFDAI RAADVRPAPP 180 PTTTSRRDED PLTSLSLSLP GQQDQQGSSG FRHDSARSHF HELSPS
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in auxin response. Functions in auxin signal transduction and modulates lateral root growth. Interacts with ARF response factors to promote auxin-responsive gene expression (PubMed:17675404). In response to auxin, binds sequence-specific motifs in the promoter of the auxin-responsive gene IAA19, and activates IAA19 transcription. The IAA19 transcription activation by MYB77 is enhanced by direct interaction between MYB77 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:17675404, ECO:0000269|PubMed:24894996}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by auxin (PubMed:17675404). Down-regulated by potassium deprivation (PubMed:15173595). {ECO:0000269|PubMed:15173595, ECO:0000269|PubMed:17675404}. |