PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc05499.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 144aa MW: 15189.4 Da PI: 4.3977 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 24.9 | 5e-08 | 125 | 144 | 2 | 22 |
AP2 2 gykGVrwdkkrgrWvAeIrdp 22 +++GVr+++ +g+W+AeIrdp Zmw_sc05499.1.g00010.1.am.mk 125 RFRGVRQRP-WGKWAAEIRDP 144 69*******.**********6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 11.456 | 125 | 144 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.9E-8 | 125 | 144 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence Send to blast |
MSGGWWWKPA DQEDVDGAAA TAPVLSGEYQ ALEMSTMVSA LAHVVAGGDD DPEAMVGGEY 60 AHAPPALQGG GYYYSDASAP TPDQHFAAAG DQEQSRHDVQ GAAAATMDEH HQSPTPAAEA 120 SGGRRFRGVR QRPWGKWAAE IRDP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010231329.2 | 1e-23 | ethylene-responsive transcription factor ERF110 | ||||
TrEMBL | A0A2T7EDC7 | 3e-31 | A0A2T7EDC7_9POAL; Uncharacterized protein | ||||
STRING | Pavir.J02402.1.p | 2e-24 | (Panicum virgatum) |