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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc05230.1.g00020.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
SBP |
Protein Properties |
Length: 354aa MW: 38556.1 Da PI: 8.3322 |
Description |
SBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc05230.1.g00020.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SBP | 129.9 | 9.2e-41 | 152 | 228 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78
CqvegC+ dls+ak+yhr+h+vCe+hskap+v+v+gle+rfCqqCs+fh+lsefD+ krsCrrrL++hn+rrrk+q+
Zmw_sc05230.1.g00020.1.am.mkhc 152 CQVEGCKFDLSSAKNYHRKHRVCEAHSKAPKVIVNGLERRFCQQCSQFHALSEFDQIKRSCRRRLNDHNARRRKQQP 228
**************************************************************************997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
GO:0048653 | Biological Process | anther development |
GO:0005634 | Cellular Component | nucleus |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 354 aa
Download sequence Send
to blast |
MDWSQRGSML WDWENLSPIG ANSNDNPTIS LQAEPKFACF EDTGHESVHS SCGTFSSNSE 60 MGYCSSKSSI ASIDSSPKPR DTVELNFALV KVLGKGTDHK TALGKVDDAR SSPSSVIAVS 120 SGEPVIGLKL VTPTTTSTKK AKVAQTAQNV YCQVEGCKFD LSSAKNYHRK HRVCEAHSKA 180 PKVIVNGLER RFCQQCSQFH ALSEFDQIKR SCRRRLNDHN ARRRKQQPDA ISFGASRLST 240 MFYGIEASVA AANLNGAPDL QRALSLLSNN SADASSDQPI SQLHPALVTI ASSYNPVVQG 300 SSGLWQDGTA LDHEARFQAF DPVSNRSPIA APHQLHLLKL PAYDSSPSRY DQMN
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Functional Description ? help
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Source |
Description |
UniProt | Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development. {ECO:0000250}. |
UniProt | Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May be involved in panicle development. {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Negatively regulated by microRNAs miR156b and miR156h. {ECO:0000305|PubMed:16861571}. |
UniProt | INDUCTION: Negatively regulated by microRNAs miR156b and miR156h. {ECO:0000305|PubMed:16861571}. |