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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc05223.1.g00030.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
MYB |
Protein Properties |
Length: 450aa MW: 50024.1 Da PI: 9.9757 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc05223.1.g00030.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 55.9 | 9.5e-18 | 4 | 49 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg W + Ede+l+++v+++G+++W++Ia++++ gR++k+c++rw++
Zmw_sc05223.1.g00030.1.am.mk 4 RGHWRPSEDEKLKELVALYGPHNWNAIAEKLQ-GRSGKSCRLRWFNQ 49
899*****************************.***********996 PP
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2 | Myb_DNA-binding | 51.2 | 2.9e-16 | 56 | 99 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
r ++++eE+ell+ ++ +G++ W+ Iar ++ gRt++ +k++w+
Zmw_sc05223.1.g00030.1.am.mk 56 RSPFSEEEEELLLASHRVHGNR-WAVIARLFP-GRTDNAVKNHWHV 99
789*******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 450 aa
Download sequence Send
to blast |
MCTRGHWRPS EDEKLKELVA LYGPHNWNAI AEKLQGRSGK SCRLRWFNQL DPRINRSPFS 60 EEEEELLLAS HRVHGNRWAV IARLFPGRTD NAVKNHWHVI MARRCRERTR MANKRCGAAA 120 GSAMENDSNP RSAMKDRPDV ANSMASLLDK YRSEVTGPFA IGHGSMEGYR STTDEDMTTD 180 KSVEFYDFLQ VNANSSDTKC GSSIEEQDEN RADDDQAEGG QVPFIDFLKV GASHPLPTPR 240 AYRAHHHRDT ADAASSAQHR PARARVIDRA GVAFRGAVSW PRPRERRDGR RFRSWPMRQS 300 SCRCRAHIAV LVADVTALTH SIDGRAGGGL VTGKAGTTTA GRLPFRYFMV VASRLRGRAS 360 ERRVPFRLRW VVGRPGLGVG GEAVEVGTDG WSGSTMSTWW SGERAADRSI DEDAMRCNVH 420 IVWVVGPGPR DGSVAIQGEI SHRDTSMGLG
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that confers sensitivity to abscisic acid (ABA) and salt, but tolerance to drought (PubMed:21399993). Regulates secondary cell wall (SCW) biosynthesis, especially in interfascicular and xylary fibers (PubMed:18952777, PubMed:23781226). {ECO:0000269|PubMed:18952777, ECO:0000269|PubMed:21399993, ECO:0000269|PubMed:23781226}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By abscisic acid (PubMed:16463103, PubMed:21399993). Accumulates in response to salt (PubMed:21399993). Triggered by MYB46 and MYB83 in the regulation of secondary cell wall biosynthesis (PubMed:19674407, PubMed:22197883). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:19674407, ECO:0000269|PubMed:21399993, ECO:0000269|PubMed:22197883}. |