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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zmw_sc05201.1.g00030.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
B3 |
Protein Properties |
Length: 327aa MW: 35731.6 Da PI: 10.3156 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc05201.1.g00030.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 101.2 | 5.8e-32 | 148 | 245 | 1 | 90 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT- CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangL 74
f+k+ tpsdv+k++rlv+pk++ae+h g + +++ l +ed +g++W+++++y+++s++yvltkGW++Fvk++gL
Zmw_sc05201.1.g00030.1.sm.mk 148 FDKTVTPSDVGKLNRLVIPKQHAEKHfplelpsAGGESKGVLLNFEDAEGKVWRFRYSYWNSSQSYVLTKGWSRFVKDKGL 228
89*******************************5556799***************************************** PP
-TT-EEEEEE-SS.SEE CS
B3 75 kegDfvvFkldgr.sef 90
++gD+v F+++ ++
Zmw_sc05201.1.g00030.1.sm.mk 229 NAGDVVGFYRTAAgADT 245
*********76544554 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MVVCCWRPQK PRRPPPTKPT RPYNPHLPAH IYERHQRVWL GTFAGEGDAA RAYDVAAQRF 60 RGRDAVTNFR PLADADLDAA AELRFLASRS KAEVVDMLRK HTYFDELAQN RRSFASAPTT 120 SSSLAANNHD SSSSSPSPAS AAAREHLFDK TVTPSDVGKL NRLVIPKQHA EKHFPLELPS 180 AGGESKGVLL NFEDAEGKVW RFRYSYWNSS QSYVLTKGWS RFVKDKGLNA GDVVGFYRTA 240 AGADTKLFIE CKLRPKNGAA VSVAANPVIN VPSSAPVTKA VRLFGVDLLT APAPEAAMGT 300 GCKRARDFAA TPTQAAFKKP LVELALV
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 2e-52 | 142 | 258 | 2 | 117 | B3 domain-containing transcription factor NGA1 |
5os9_B | 2e-52 | 142 | 258 | 2 | 117 | B3 domain-containing transcription factor NGA1 |
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