PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc05050.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 434aa MW: 46185.6 Da PI: 9.7918

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc05050.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.4	1.8e-39	195	254	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++ lkcprC+st+tkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk++ Zmw_sc05050.1.g00040.1.am.mk 195 HDQPLKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGSLRNVPVGGGCRKNKRA 254 7899******************************************************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	7.0E-29	193	249	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	5.2E-33	196	253	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.227	199	253	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	201	237	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence Send to blast
MRAGGGGRAG PKEPNQKPTR TGEGDGHGGP RMQARTTLLL RYASTATYIG ITRHAAGCCC 60 SPRPLDEGSE PFPSLLIHIS TPPRRRPHRT PTTTTATSSA SFRLAASSLQ FFSSAPKSIS 120 LNIRRRIEHR LTTKVDRSMM AGAPPMHICM DSDWFKGIVP EEPGMGSSSP STELIACPRQ 180 MHPAAAADRR LRPQHDQPLK CPRCESTHTK FCYYNNYSLS QPRYFCKTCR RYWTKGGSLR 240 NVPVGGGCRK NKRAGAKKPA APPLQAHARH MAETGLHLSF SSSGMQQLLP PPAAADPLCS 300 LGLLDWKYDP ILMGSAGGAA ALEGASSEAH FTGPGMMGMP GVGGECHALS ALRYAAGLGD 360 HLQAPPPPFG SSLAEHNGVE VKPAAAERLL SLEWYGTEAS RAPESAISSF GALGLWSGML 420 GGAHQQHHGS SAAI

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence Send to blast

MRAGGGGRAG PKEPNQKPTR TGEGDGHGGP RMQARTTLLL RYASTATYIG ITRHAAGCCC  60
SPRPLDEGSE PFPSLLIHIS TPPRRRPHRT PTTTTATSSA SFRLAASSLQ FFSSAPKSIS  120
LNIRRRIEHR LTTKVDRSMM AGAPPMHICM DSDWFKGIVP EEPGMGSSSP STELIACPRQ  180
MHPAAAADRR LRPQHDQPLK CPRCESTHTK FCYYNNYSLS QPRYFCKTCR RYWTKGGSLR  240
NVPVGGGCRK NKRAGAKKPA APPLQAHARH MAETGLHLSF SSSGMQQLLP PPAAADPLCS  300
LGLLDWKYDP ILMGSAGGAA ALEGASSEAH FTGPGMMGMP GVGGECHALS ALRYAAGLGD  360
HLQAPPPPFG SSLAEHNGVE VKPAAAERLL SLEWYGTEAS RAPESAISSF GALGLWSGML  420
GGAHQQHHGS SAAI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004953626.1	1e-165	dof zinc finger protein 1
TrEMBL	K3YUL6	1e-164	K3YUL6_SETIT; Uncharacterized protein
STRING	Si017962m	1e-165	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4704	32	63