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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc04988.1.g00050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 752aa MW: 81676.8 Da PI: 9.9637 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.7 | 5e-17 | 163 | 213 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 + y+GVr++ g+Wv+eIr+ + r++lg++ t+e+Aa+a++aa+++l+g+ Zmw_sc04988.1.g00050.1.am.mk 163 PVYRGVRFR--AGKWVSEIRElR-----KpSRIWLGTYPTPEMAAAAYDAAALALRGA 213 68*****96..5*********66.....68*************************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 4.0E-11 | 163 | 212 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 6.8E-25 | 164 | 221 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.966 | 164 | 220 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.2E-17 | 164 | 221 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.1E-23 | 164 | 226 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.0E-5 | 165 | 176 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.0E-5 | 202 | 222 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 752 aa Download sequence Send to blast |
MRPSTKFCWS YQRCELPSSA FRHLDRPATT IDRVPVTSSC TSRTKRLFRR PPIAPVTPLD 60 VDVASLRGPA VQKPDERVAG SFTRSFPSVE RAGNAFRQVT FARNDLTNSD GFPTRFVRAS 120 GKLCLCTCNA DVLMERGRQD QERFVRPGAS ACVRRARAET RHPVYRGVRF RAGKWVSEIR 180 ELRKPSRIWL GTYPTPEMAA AAYDAAALAL RGAGAALNFP DAARALPXKA VDGGATGRGR 240 SDRDHEPHEV GCSNGDADYE RRDDDGGGGA AMEGGVVDED DVFEMPRLMV SMAEGLMMSP 300 PVLGPPAAAS LEDEDGVSLV WCEMRTRAAA VCWQMDACGI SPDVDTGITL GCMPGSGDVD 360 VARRAVLPHW LPVAWCRPSG LSCAPKHSKA KQLPDLLCTH RHRVERRIET RSYRDRWTES 420 QGGQAVSHAG GASGQHGNTS GARDYRNDGT AGAPISRPKQ NAAGPQLLRA CRASPSIRGG 480 AAGRGNRAGG SAGRRAALCV VLLLETTEQC KLILSEPPVS IAVAPCPHQP RRAGDATPRL 540 GRPRRRWGER GSLEHERSST GDGTTWRGDT VEKARDDDDE PTAAGRYADE RVMRTSDTLE 600 SAPASSLASI EAPWLAAARW EPGAAVQWRK MTPGSSKTKH TLNPRAHANP SDSTTNLAPR 660 PVSPAAWRSP SPPREPQPET STCSRMKTSF NSRSFFYYHP HGRPARARRT AEAARQPRQL 720 PSPLKIARAL QLDAAGHRAR TLALTFCLLL HC |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP159 | 35 | 354 |