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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc04978.1.g00060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 269aa MW: 29293.5 Da PI: 9.4821 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.1 | 3.8e-17 | 33 | 83 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 + y+G+r++ g+Wv+eIr+p++ + r++lg++ t+e+Aa+a++ a+++l+g+ Zmw_sc04978.1.g00060.1.am.mk 33 PVYRGIRYRG--GKWVSEIREPRK---SNRIWLGTYPTPEMAAAAYDVAALALRGA 83 68*****975..*********954...49************************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 1.9E-11 | 33 | 82 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.481 | 34 | 90 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.9E-26 | 34 | 90 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.47E-18 | 34 | 90 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 5.0E-25 | 34 | 96 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.7E-6 | 35 | 46 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 7.02E-14 | 35 | 90 | No hit | No description |
PRINTS | PR00367 | 3.7E-6 | 72 | 92 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence Send to blast |
MEPDPEQEVV QDAAGTPFPG SVVRRARADT RHPVYRGIRY RGGKWVSEIR EPRKSNRIWL 60 GTYPTPEMAA AAYDVAALAL RGADAALNFP GAARSRPXXX XXXXXXTSAR LRRLLLQPRL 120 PIWRSSRRES ATSPPADAGA SSEQNDKAGE KEKRIVDEDD VFQVPRLLAG MAEGLMMSPP 180 RLSPTTDGAA SPDGAPWARG AACMVFATKH GPARAHKKAQ HGIRLFDGPT TEAQVDLQAR 240 FATTTSESGE KESDADDAHR LPNSDSVQH |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022685545.1 | 2e-56 | ethylene-responsive transcription factor ERF024 | ||||
TrEMBL | K4AK41 | 3e-55 | K4AK41_SETIT; Uncharacterized protein | ||||
STRING | Si039264m | 6e-56 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP159 | 35 | 354 |