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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc04973.1.g00090.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
B3 |
Protein Properties |
Length: 78aa MW: 9131.53 Da PI: 6.6298 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc04973.1.g00090.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 33.6 | 6.9e-11 | 21 | 76 | 4 | 57 |
E-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETT CS
B3 4 vltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksg 57
l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d +g++W ++++y+ + +
Zmw_sc04973.1.g00090.1.sm.mk 21 MLSASDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDINGKEWLFQFRYWPNNN 76
6789*********************555566778*****************77654 PP
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6fas_A | 3e-33 | 5 | 78 | 1 | 69 | B3 domain-containing transcription repressor VAL1 |
6fas_B | 3e-33 | 5 | 78 | 1 | 69 | B3 domain-containing transcription repressor VAL1 |
6j9a_A | 3e-33 | 20 | 78 | 26 | 84 | B3 domain-containing transcription repressor VAL1 |
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional repressor of gene expression involved in embryonic pathways, such as LEC1, ABI3, and FUS3. Repressor of the sugar-inducible genes involved in the seed maturation program in seedlings. Plays an essential role in regulating the transition from seed maturation to seedling growth. Functionally redundant with VAL1/HSI2. {ECO:0000269|PubMed:17158584, ECO:0000269|PubMed:17267611}. |