PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zmw_sc04940.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 354aa MW: 37647.1 Da PI: 8.8124

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04940.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	44.8	3.8e-14	139	185	1	48
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 lp+GfrFhPtdeel+ +yL++k+ + +l++ ++i+ +d+ +++PwdL Zmw_sc04940.1.g00030.1.am.mk 139 LPVGFRFHPTDEELLLHYLRRKALACSLPA-DIIPVADLARLHPWDLV 185 79**************************.99************3 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	3.92E-17	136	187	IPR003441	NAC domain
PROSITE profile	PS51005	13.277	139	287	IPR003441	NAC domain
Pfam	PF02365	4.6E-7	140	192	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence Send to blast
MNRGLDTGAA VQVHVLCRAG STVYQDRRHG MERDATHATP SVLFLYPARA PAVPSSSLHA 60 TDATAEACAS DSERHCTALV VLPLPQSTES SAAITDVRTS SPSCMLGGAG HRASRRCVAM 120 EARQAAGAAA AGGGALAGLP VGFRFHPTDE ELLLHYLRRK ALACSLPADI IPVADLARLH 180 PWDLVPPGAR RFLLYLSLAL KVMNCHGDGA AAGAEDWVVC RIFKRTKPGH GGRGGEEAEE 240 IPSFLFTKHL LPVPTARCCP PKHKNKVEAK GEQKGDDDKV FDAVTDWREA VVASDRYLSS 300 PRGSSLLLLL PPGGRRSIGG MGISFRVAGL IRSSCRCKAS PRLALSLPES NRSE

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence Send to blast

MNRGLDTGAA VQVHVLCRAG STVYQDRRHG MERDATHATP SVLFLYPARA PAVPSSSLHA  60
TDATAEACAS DSERHCTALV VLPLPQSTES SAAITDVRTS SPSCMLGGAG HRASRRCVAM  120
EARQAAGAAA AGGGALAGLP VGFRFHPTDE ELLLHYLRRK ALACSLPADI IPVADLARLH  180
PWDLVPPGAR RFLLYLSLAL KVMNCHGDGA AAGAEDWVVC RIFKRTKPGH GGRGGEEAEE  240
IPSFLFTKHL LPVPTARCCP PKHKNKVEAK GEQKGDDDKV FDAVTDWREA VVASDRYLSS  300
PRGSSLLLLL PPGGRRSIGG MGISFRVAGL IRSSCRCKAS PRLALSLPES NRSE

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP22784	4	6