PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zmw_sc04890.1.g00090.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 375aa MW: 40271.2 Da PI: 9.0611

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04890.1.g00090.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	35.4	2.5e-11	72	97	2	27
G2-like 2 prlrWtpeLHerFveaveqLGGsekA 27 pr+rWt+ LH++Fv+ave LGG+e A Zmw_sc04890.1.g00090.1.am.mk 72 PRMRWTTALHAHFVHAVELLGGHETA 97 9**********************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.5E-8	69	97	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence Send to blast
MSSAAATGVT PDLSLHISPP SPAAGGGATP EGLDAAQRSL RAQQRLHQPN QTAHGFKKSS 60 SSGGGKRSSR APRMRWTTAL HAHFVHAVEL LGGHETALVQ TTYVYGLQCD DQTYEDSISL 120 PPPKPAASIV FLMVPRSQPA QPSAAALLII RRIQIRSTSI VPLPVPGPIS CNCRWNLGKS 180 QSPAEQQQQQ QQQLEHHNAA WIQALLVQHQ LPSTCRTVLP HQYIRLQPDR LFMEQRQRQK 240 GGGAQDHREG AVAHDLAEAG RPAINQKGLS APPTSLVHDA ETVVRGPPSS SNTSSSGDTA 300 SSSDWLQQQT LLMPASTQRY GSNGAITWLT STTPPPPTLE MSLGRQGWQV EQQCGGGGEF 360 EPAPSAKDRT LLKCL

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence Send to blast

MSSAAATGVT PDLSLHISPP SPAAGGGATP EGLDAAQRSL RAQQRLHQPN QTAHGFKKSS  60
SSGGGKRSSR APRMRWTTAL HAHFVHAVEL LGGHETALVQ TTYVYGLQCD DQTYEDSISL  120
PPPKPAASIV FLMVPRSQPA QPSAAALLII RRIQIRSTSI VPLPVPGPIS CNCRWNLGKS  180
QSPAEQQQQQ QQQLEHHNAA WIQALLVQHQ LPSTCRTVLP HQYIRLQPDR LFMEQRQRQK  240
GGGAQDHREG AVAHDLAEAG RPAINQKGLS APPTSLVHDA ETVVRGPPSS SNTSSSGDTA  300
SSSDWLQQQT LLMPASTQRY GSNGAITWLT STTPPPPTLE MSLGRQGWQV EQQCGGGGEF  360
EPAPSAKDRT LLKCL

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP27424	4	5