PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04810.1.g00070.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 370aa    MW: 40252.2 Da    PI: 8.8559
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04810.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY65.96.6e-21229290259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSS..TTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaed..pkvveitYegeHnhe 59 
                                    Dg+ WrKYGqKe++g ++pr Y+rC+ +  +C+++++v+r++ed  p + ei Y geH+++
  Zmw_sc04810.1.g00070.1.am.mk 229 ADGFIWRKYGQKEINGRKHPRLYHRCANRhlSCTATRRVQRTHEDhePAAYEIAYYGEHTCS 290
                                   6**************************9989**********9987336799*********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.1E-21222290IPR003657WRKY domain
SuperFamilySSF1182904.97E-19223290IPR003657WRKY domain
PROSITE profilePS5081115.388223290IPR003657WRKY domain
SMARTSM007747.8E-25228291IPR003657WRKY domain
PfamPF031066.8E-22230289IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MKFEESSEEP GSLPHHRTVC DAETRTIRPP GTWDGVRTPD TCDGCEQVKG RGAGLRVCER  60
LGADRGVRGD PGKTASRRLS SGCLRLRFAC RPDVYKYTLA TVIASSRSST LLPSRPSACC  120
GSAGRDNLKE AEINNPYAMV LELMTRGQQS LAYLTDQFRD APPQQELAVE ILRCCNRVIA  180
ALRAGSSGKK RKHEDAAVAA ASSPPAMPPR KRPRGAEEPT RVVTSGTTAD GFIWRKYGQK  240
EINGRKHPRL YHRCANRHLS CTATRRVQRT HEDHEPAAYE IAYYGEHTCS GAAVAASPAP  300
RPPALVDFGS NAWASVGPAA PAPVSERRQV LSWEREMLSP GGWSSSASSA EARFEAQTTH  360
DAAPVEQPCY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-142302891068OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGSb03g038210.13e-66(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP83223147