PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04810.1.g00060.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 701aa    MW: 76676.1 Da    PI: 9.7023
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04810.1.g00060.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY635.3e-20537598258
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-S...SSTTEEEEEEES--SS CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversa...edpkvveitYegeHnh 58 
                                   +Dg+ WrKYGqKe++g ++pr Y+rC+ +  gC+++++v+r++   e+p + ei Y g H++
  Zmw_sc04810.1.g00060.1.am.mk 537 EDGFIWRKYGQKEINGRKHPRLYFRCANRhqGCTATRRVQRTHvddEEPPAYEIAYYGAHTC 598
                                   7*************************98777**********8722255779*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081116.777531581IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.1E-21531599IPR003657WRKY domain
SuperFamilySSF1182901.16E-19531599IPR003657WRKY domain
SMARTSM007741.7E-27536600IPR003657WRKY domain
PfamPF031066.0E-22537598IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 701 aa     Download sequence    Send to blast
MAGKKGRGRC TAQRKTLLDD GYPAKQGSAS LVVFEIEKLV QSAKCGASLF PSLHFATAQE  60
HQKMHGAEGA QAAAGNDEHL RGVRPLLLSP AGAQGRRRRG FFPSEELPRL ELDRSCFFGG  120
TRSLPLLLGR FCGGFGWFRC WRREMLDGER ASLAWASATT QFPVVGQGRC ACAAGRLWWG  180
PHAKALVPVR WSSFPFVAWR QRAVVRFQEV AAASSASRVP WRAVIVKPHG RRPPVYDGAR  240
QMDLGGDRRS RAPSSRRIDL TASSISYGTG CEKDAALKSQ VEPSRARPWT VDELIHRSEF  300
SPDNPVLDVT ETGTVVSALA QAINLPGSAT CPNRNQSAPP FIYGIFTNRT LGTGHLPFLL  360
RPSRVIIHRH SMASLSLSES LMIKGPEESQ PLRLRYAGRR RKKLRQKKKK NLSPSVTRCF  420
DVASSPSLRV MALATPDAVV LELMTMGQQS AAHLGYLLRS ASPASPHQDL AAEILRCCER  480
VISRLKANGG ASGCCNKRKA AEHNGSAAAW SPPSTPPRKR ARVGAEALGV VTSRTTEDGF  540
IWRKYGQKEI NGRKHPRLYF RCANRHQGCT ATRRVQRTHV DDEEPPAYEI AYYGAHTCGG  600
TAACQPQLPP TVVDFGFSTW GCSTATAASE QPWLSCDSET SEAGFDEAQT TTMHEWHHAA  660
ALVEVPSATT PCYASDPVTE FLDGCFDWES VINDVPFDFG A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-16531598368OsWRKY45
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1397405GRRRKKLRQ
2398404RRRKKLR
3399409RRKKLRQKKKK
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP83223147