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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc04810.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 166aa MW: 18277.3 Da PI: 4.8421 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 30 | 1e-09 | 2 | 40 | 24 | 58 |
EEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS CS WRKY 24 YYrCtsa...gCpvkkkvers.aedpkvveitYegeHnh 58 YYrCt++ +Cp++k+ve++ ++dp ++ ++Y++eH++ Zmw_sc04810.1.g00010.1.sm.mk 2 YYRCTYHqdhSCPATKHVEQTnSQDPPLFRVIYTNEHTC 40 ******98999*******975268*************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.3E-8 | 2 | 40 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.72E-8 | 2 | 40 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.4E-11 | 2 | 40 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.7E-7 | 2 | 42 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence Send to blast |
FYYRCTYHQD HSCPATKHVE QTNSQDPPLF RVIYTNEHTC ICGDPSSIHI QQMADASLRK 60 AEIELFPSLA PCNAGHEMIK EEEGAIVSSL LGVINGGDDV ATSESLRRDM QENTAALSSS 120 KYSNLSSKVD TRSSHEANPS ISPVLLPASE EPRMNLVEPL ESHCCN |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004972233.1 | 7e-58 | probable WRKY transcription factor 29 | ||||
TrEMBL | A0A1E5V3T9 | 6e-53 | A0A1E5V3T9_9POAL; Uncharacterized protein | ||||
TrEMBL | K3XS92 | 2e-56 | K3XS92_SETIT; Uncharacterized protein | ||||
STRING | Si004791m | 3e-57 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP11814 | 31 | 39 |