PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zmw_sc04569.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

HSF

Protein Properties

Length: 341aa MW: 37226.8 Da PI: 10.7268

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04569.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	54.8	2.6e-17	233	283	10	60
HCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 10 ledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 l++++ + +isw + nsfvv+d+++fa+++Lp +Fkhsnf+SFvRQ n+Y Zmw_sc04569.1.g00030.1.am.mk 233 LHSRRWTGVISWGAAWNSFVVWDPSTFARDILPYHFKHSNFSSFVRQFNTY 283 67788899******************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00415	1.7E-5	220	312	IPR000232	Heat shock factor (HSF)-type, DNA-binding
Gene3D	G3DSA:1.10.10.10	4.3E-16	233	284	IPR011991	Winged helix-turn-helix DNA-binding domain
SuperFamily	SSF46785	5.71E-14	233	283	IPR011991	Winged helix-turn-helix DNA-binding domain
Pfam	PF00447	2.6E-13	234	283	IPR000232	Heat shock factor (HSF)-type, DNA-binding

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence Send to blast
MMQIQVVTPA CTASLPNSSY LPNDLLALSL PTRRKGWTEE KGRRVITGAE SAQRIGLVPT 60 RDVHARKGVI ALFSGGQRFD HLLIILATGT AAMRANLIYL LCYAFSGFRA KQMRGWPSGA 120 LLWLRHCVGS QQWGLRDHRP ASGSTPYTSP PQCGPPPPSH LHACLLTQGQ CPRRALPDWL 180 GLHGGAAGAQ ARGRGGAAAI VAGPFVPLDQ LIPRPGPDTP RPLQALLPGH SSLHSRRWTG 240 VISWGAAWNS FVVWDPSTFA RDILPYHFKH SNFSSFVRQF NTYVRAGQVS HSGTINLIWA 300 HIKALVADTI RELATLTTSS FHVGRWCSEF LDQAALLPDH P

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP27864	2	2