PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04547.1.g00010.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 127aa    MW: 13880.6 Da    PI: 4.1449
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04547.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.26.6e-161961248
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
                                  +y+GVr +k +g+Wv+eIr+p   gk++r++lg+f ++e+Aa a++ 
  Zmw_sc04547.1.g00010.1.am.mk 19 QYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFESPEMAAVAHDL 61
                                  69****999.**********8...557*****************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.108.3E-231961IPR001471AP2/ERF domain
SMARTSM003803.8E-201988IPR001471AP2/ERF domain
PROSITE profilePS5103217.6221963IPR001471AP2/ERF domain
CDDcd000181.23E-201963No hitNo description
SuperFamilySSF541712.62E-161967IPR016177DNA-binding domain
PRINTSPR003671.1E-92031IPR001471AP2/ERF domain
PfamPF008476.3E-102061IPR001471AP2/ERF domain
PRINTSPR003671.1E-94258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
MAMVLDNNVA AGELTAAGQY RGVRKRKWGK WVSEIREPGK KTRIWLGSFE SPEMAAVAHD  60
LLAGVAWDDV LLCGGAADDL AADQSSPSMW AELAEAMLMA PPVWEGSTAD NDDWGQSSLW  120
DLPVWNY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010930490.13e-31ethylene-responsive transcription factor ERF038
TrEMBLA0A1E5VJX22e-41A0A1E5VJX2_9POAL; Uncharacterized protein
STRINGTRIUR3_32331-P13e-40(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22443389