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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zmw_sc04544.1.g00020.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
MYB |
| Protein Properties |
Length: 266aa MW: 28749.3 Da PI: 5.846 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zmw_sc04544.1.g00020.1 | genome | ZGD | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 47.2 | 5.1e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g WT+eEd +lv +G +W+++++ g+ R++k+c++rw +yl
Zmw_sc04544.1.g00020.1.sm.mk 14 KGTWTAEEDHKLVTFLLSHGHCCWRLVPKLAGLLRCGKSCRLRWTNYL 61
799*****************************99************97 PP
|
| 2 | Myb_DNA-binding | 54.3 | 3.1e-17 | 70 | 111 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+ eE+ l +d+++qlG++ W++Ia++++ gRt++++k++w+++
Zmw_sc04544.1.g00020.1.sm.mk 70 LSDEEEALVIDLHAQLGNR-WSKIAARIP-GRTDNEIKNHWNTH 111
589****************.*********.************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MGRQPCCDKV GLKKGTWTAE EDHKLVTFLL SHGHCCWRLV PKLAGLLRCG KSCRLRWTNY 60
LRPDLKRGLL SDEEEALVID LHAQLGNRWS KIAARIPGRT DNEIKNHWNT HIKKKLRKMG 120
IDLVTHRPLS PAARSGEPLT QQQCQDPPQD EPKTSSQRPA GGNEDDDGNE EAPVSAAQPQ 180
LAAASPASAA ATVSPSCSSS ASASVTTTPG ADVAAWSDPV DLFEVDGIMD MDWAGILSGC 240
GGDGAGISVD LFDHYPGDGF DQQVWM
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that acts as positive regulator of abscisic acid (ABA) signaling in response to salt stress. Acts as negative regulator ABI1, ABI2 and PP2CA, which are protein phosphatases 2C acting as negative regulator of ABA signaling. Binds to the DNA specific sequence and core element 5'-ACGT-3' found in the promoters of ABI1 and PP2CA to negatively regulate their expression during ABA-dependent salt stress response. {ECO:0000269|PubMed:23660402}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt stress, drought stress and abscisic acid (ABA). Down-regulated by salicylic acid (SA) methyl jasmonate (JA). {ECO:0000269|PubMed:23660402}. |
