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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zmw_sc04500.1.g00040.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
MYB |
Protein Properties |
Length: 337aa MW: 36758.8 Da PI: 7.0328 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc04500.1.g00040.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 35.9 | 1.8e-11 | 55 | 123 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....................TTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....................kgRtlkqcksrwqkyl 48
rg+W +Ed+ lv++v+ +G g+W++ a+ g ++Rt+k+c++rw++yl
Zmw_sc04500.1.g00040.1.am.mk 55 RGPWMVDEDLALVNYVAAHGEGRWNSLAAAAGtyvlafslcfsslanaaiytgLKRTGKSCRLRWLNYL 123
89********************9999999999999999999999999999*****************97 PP
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2 | Myb_DNA-binding | 55.8 | 1e-17 | 129 | 172 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg++T++E+ l++d++ ++G++ W++Ia++++ gRt++++k++w++
Zmw_sc04500.1.g00040.1.am.mk 129 RGNFTADEQMLILDLHSRYGNR-WSKIAQHLP-GRTDNEIKNYWRT 172
89********************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 337 aa
Download sequence Send
to blast |
MLNRSTSNSN MASSPHSSHS ATAPAPTTDA LFARSSGVAV DVDGGAGQKD QLIRRGPWMV 60 DEDLALVNYV AAHGEGRWNS LAAAAGTYVL AFSLCFSSLA NAAIYTGLKR TGKSCRLRWL 120 NYLRPDVKRG NFTADEQMLI LDLHSRYGNR WSKIAQHLPG RTDNEIKNYW RTRVQKHAKQ 180 LNCDANSKRF KDAMRYLWMP HLVDGHRHHL HAADHQQQAT ATAANHDGYY HAAAALSAGA 240 MGVPSSSSDS FATTTSESYE YDAGFPPNWE PSSCYDSAAA GGLYAGEMLV PGGGGDCWVQ 300 ETSQQQAGMM WPEEQKAALG VNGGQFEDAE LNVWKTQ
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