PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zmw_sc04394.1.g00100.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 1033aa MW: 109178 Da PI: 10.8296

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04394.1.g00100.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.3	1.4e-37	742	799	3	60
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++ l+cprC+s+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rk + Zmw_sc04394.1.g00100.1.am.mk 742 QAPLPCPRCNSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKPRP 799 66789**************************************************875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	2.7E-31	744	798	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.357	745	799	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	4.0E-25	745	796	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	747	783	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1033 aa Download sequence Send to blast
MPGALRASNT ILIAVSFYPS TIHGLGRRDL ASITLWAQVF APPARAVRGL MLYLTLGTPT 60 PTPTDRLRAL RAGRWCSFLL DAMMMAVPES LSSGAAPAPI RVGLEALGLS APHCRAEEPA 120 RSLPGARTFR EIKRCVPGRS DKAAGNGEEA HKEWNGNTER FCHVVTGSTA SFQASFRELQ 180 QQSHPNGGLR PVPAGEKRRC TSPTRSIFSA PRSSTSMTAS NRVRAHPHPD PALCLCLRSE 240 SHRRRRSNSS EVTGGGRGTG KAWKGTGEFV SSCPVLSSCP APSRRACMHG QTCVGRYEAR 300 HRPGPWQGGS LLPAPVVRPS VRPSIFPELR KRILRETDRR SMCSPLIRVS ACPDSDTEYY 360 SRFPGRTKES ANSAPMLRGS KWVSAAFYPQ VDTAAACRRT RGPIEERIPR PASSTDRLIA 420 MTGRLAAAIP SPSLFPLSVR RFTALRLPAG PRALPLSSRA GVGPEQAVHS AAAPCREGTS 480 ARLGLGWVGG LEQTRAQESG GRGAPAPHRA CLRGAPVAGM PHACFPRPAS QPWESVIDDK 540 HGADRPRPGK ATRPDAVRPS FAGERIPNFL SAVYDMHAWP AEKAHPSTVH TTRAGAGLKY 600 AFFATSRQGP GCLLNAPAAE LDCHDHTLPV PGRPYPAARF AGHAGRNVTS PRRLSLRFPV 660 SPSVTMIQEL LGGAAMDQLK SVNDGNPASL PMLLHPIVAA PSPTSSSSTS SRSSAQQPLP 720 PRSTSATSSP QGQQQGQGAA EQAPLPCPRC NSSNTKFCYY NNYNLTQPRH FCKTCRRYWT 780 KGGALRNVPI GGGCRKPRPM PTPAAKPVMS CKGLGGGPQL GLGVGMGMGG ASPVPWAPSQ 840 QTAAAQLMAL LSSARGMQGH GGSNVHRLLG LDSIGHLPLH VLPGTGNATG APASLWPPSA 900 PRQVPATPAN MDSQLGMGPL GHNDVLSNLG LKLPPSSQSP APNYYNDQLH AVVSNAGRAR 960 EYDASSTSLP CTTTVTSLPP AVSSISAALS GATAGQLDLL PVSLAAPEMQ YWTGPAAMPV 1020 AWPDLPTPNG AFP

Sequence ? help Back to Top

Protein Sequence Length: 1033 aa Download sequence Send to blast

MPGALRASNT ILIAVSFYPS TIHGLGRRDL ASITLWAQVF APPARAVRGL MLYLTLGTPT  60
PTPTDRLRAL RAGRWCSFLL DAMMMAVPES LSSGAAPAPI RVGLEALGLS APHCRAEEPA  120
RSLPGARTFR EIKRCVPGRS DKAAGNGEEA HKEWNGNTER FCHVVTGSTA SFQASFRELQ  180
QQSHPNGGLR PVPAGEKRRC TSPTRSIFSA PRSSTSMTAS NRVRAHPHPD PALCLCLRSE  240
SHRRRRSNSS EVTGGGRGTG KAWKGTGEFV SSCPVLSSCP APSRRACMHG QTCVGRYEAR  300
HRPGPWQGGS LLPAPVVRPS VRPSIFPELR KRILRETDRR SMCSPLIRVS ACPDSDTEYY  360
SRFPGRTKES ANSAPMLRGS KWVSAAFYPQ VDTAAACRRT RGPIEERIPR PASSTDRLIA  420
MTGRLAAAIP SPSLFPLSVR RFTALRLPAG PRALPLSSRA GVGPEQAVHS AAAPCREGTS  480
ARLGLGWVGG LEQTRAQESG GRGAPAPHRA CLRGAPVAGM PHACFPRPAS QPWESVIDDK  540
HGADRPRPGK ATRPDAVRPS FAGERIPNFL SAVYDMHAWP AEKAHPSTVH TTRAGAGLKY  600
AFFATSRQGP GCLLNAPAAE LDCHDHTLPV PGRPYPAARF AGHAGRNVTS PRRLSLRFPV  660
SPSVTMIQEL LGGAAMDQLK SVNDGNPASL PMLLHPIVAA PSPTSSSSTS SRSSAQQPLP  720
PRSTSATSSP QGQQQGQGAA EQAPLPCPRC NSSNTKFCYY NNYNLTQPRH FCKTCRRYWT  780
KGGALRNVPI GGGCRKPRPM PTPAAKPVMS CKGLGGGPQL GLGVGMGMGG ASPVPWAPSQ  840
QTAAAQLMAL LSSARGMQGH GGSNVHRLLG LDSIGHLPLH VLPGTGNATG APASLWPPSA  900
PRQVPATPAN MDSQLGMGPL GHNDVLSNLG LKLPPSSQSP APNYYNDQLH AVVSNAGRAR  960
EYDASSTSLP CTTTVTSLPP AVSSISAALS GATAGQLDLL PVSLAAPEMQ YWTGPAAMPV  1020
AWPDLPTPNG AFP

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7710	31	44