PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04328.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 432aa MW: 48160 Da PI: 6.6607

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04328.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	28.9	2.5e-09	138	160	3	25
XXCHHHCHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKk 25 ++k err+++NReAAr+sR+RKk Zmw_sc04328.1.g00040.1.sm.mkhc 138 DDKTERRLAQNREAARKSRLRKK 160 589*******************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	6.4E-7	138	206	No hit	No description
PROSITE pattern	PS00036	0	143	158	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.3E-29	194	269	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence Send to blast
MVAGDSSGWQ VIMVELYHSA KHLELQPSDT ACFGELEKAL VHGTRDTSMI GSDVHAKGSS 60 SGSSSGQNTM PQAELVSPLS TRADSGHQHE ALMMSVDDYN YGQGFGATAA TAPIFQQHTA 120 GQDKRRHEST RKDGKLLDDK TERRLAQNRE AARKSRLRKK GLFLGGCSGT GDMSSGAIMF 180 DMEYARWLDD ESKHLTELQG ALQAQLIDAN LGVIVEDCMR HYDELFHLRA VLARSDVFHL 240 MTGMWATTAE RCFLWMGGFR PSEILKMLIP QLDPLTEQQL LGMCNLRQSS EQTEEALVQG 300 LQQLHQSLAD AVGAGPLDDG ASLTNYTGLM ALALDRLDSL ESFYRQADNL RQQALHHMRR 360 ILTTRQTARC FLSIGEYHRR LRALSSAWTS RPRENFVATE NVSPTGTDQA ILQHQHQHHQ 420 QQHHNQSQFS GF

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence Send to blast

MVAGDSSGWQ VIMVELYHSA KHLELQPSDT ACFGELEKAL VHGTRDTSMI GSDVHAKGSS  60
SGSSSGQNTM PQAELVSPLS TRADSGHQHE ALMMSVDDYN YGQGFGATAA TAPIFQQHTA  120
GQDKRRHEST RKDGKLLDDK TERRLAQNRE AARKSRLRKK GLFLGGCSGT GDMSSGAIMF  180
DMEYARWLDD ESKHLTELQG ALQAQLIDAN LGVIVEDCMR HYDELFHLRA VLARSDVFHL  240
MTGMWATTAE RCFLWMGGFR PSEILKMLIP QLDPLTEQQL LGMCNLRQSS EQTEEALVQG  300
LQQLHQSLAD AVGAGPLDDG ASLTNYTGLM ALALDRLDSL ESFYRQADNL RQQALHHMRR  360
ILTTRQTARC FLSIGEYHRR LRALSSAWTS RPRENFVATE NVSPTGTDQA ILQHQHQHHQ  420
QQHHNQSQFS GF

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022680635.1	0.0	transcription factor TGAL5 isoform X2
Swissprot	Q6F2N0	0.0	TGAL5_ORYSJ; Transcription factor TGAL5
TrEMBL	A0A368QJP3	0.0	A0A368QJP3_SETIT; Uncharacterized protein
STRING	LPERR05G14450.1	0.0	(Leersia perrieri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3809	31	66

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Cheng CH, et al. A fine physical map of the rice chromosome 5. Mol. Genet. Genomics, 2005. 274(4): p. 337-45 [PMID:16261349] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709]