PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04326.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 605aa MW: 67108.6 Da PI: 9.5138

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04326.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	47.8	4.6e-15	75	215	4	128
NAM 4 GfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat 70 f F P++ l+++yL+kk++g + l + +++ d++++ P L + + +++ ++ yfF+k++ ++ Zmw_sc04326.1.g00020.1.am.mk 75 SFSFCPSNALLINHYLRKKIDGADvfsnLANAAYFHDEDVCSAPPDVLVRahimparvpsREAGDGRQFYFFTKARFIGNK 155 589*******************8765333345**********744677876664333356688999998766555 PP NAM 71 gkrknratk....sgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128 ++++r++k + +W+a g+ k+v ++ g + L ++ ++ pk ek W+m ey++ Zmw_sc04326.1.g00020.1.am.mk 156 LNNRSRIIKntgdKETWHAEGSAKPVDG---TADGYMTKLSYHVKTGPKtVEKPGWIMTEYSF 215 4455553322234678*****965...6789999966555515799*****86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	3.92E-22	72	231	IPR003441	NAC domain
PROSITE profile	PS51005	22.459	72	231	IPR003441	NAC domain
Pfam	PF02365	4.0E-11	76	214	IPR003441	NAC domain
Pfam	PF11321	1.4E-23	464	596	IPR021470	Protein of unknown function DUF3123

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 605 aa Download sequence Send to blast
MPCIHQEASA AANYHPDDVG LASISDNRLP AVIGFAPGHA TDSSNSPPSP SIFLSTVSSN 60 SPPTRPIEMA AMDDSFSFCP SNALLINHYL RKKIDGADVF SNLANAAYFH DEDVCSAPPD 120 VLVRAHIMPA RVPSREAGDG RQFYFFTKAR FIGNKLNNRS RIIKNTGDKE TWHAEGSAKP 180 VDGTADGYMT KLSYHVKTGP KTVEKPGWIM TEYSFKDTKE GDLVLCKVYK SPRGPGRSKA 240 PSSPPAMSDR KRKAADDLEE ATPSTRPRQN NENHQHAAVP EFKAERSQTQ AMPASLDNNS 300 ALEDIDWSWF MPESEAERSQ PHLAKPASSG SNVTLEDIQL YAKLLLADYI RREFPRRKST 360 KRSVDKKPSA SPPVRTCDEV LKPCPRSLKE NPSSRKTSMD DEPAVNEAAS SSAVRFSRSN 420 SSSTCRLFSD EAASYRILIS SNHVRSRRKH GRPSDSEAWY EGYVIVRTRT EGMIDGKILV 480 LWLPAMVVSA TDGSYEVIYE GKLSPNDPFS CVHVPLNHVR PIKRDRPMDP KPAVAEEAHA 540 KIEDSRKPKT SARAESEVGK CKKPLYLRRD HAAETKPAPR PTTAGKSIKV IRKIMSEKGR 600 QDRYY

Sequence ? help Back to Top

Protein Sequence Length: 605 aa Download sequence Send to blast

MPCIHQEASA AANYHPDDVG LASISDNRLP AVIGFAPGHA TDSSNSPPSP SIFLSTVSSN  60
SPPTRPIEMA AMDDSFSFCP SNALLINHYL RKKIDGADVF SNLANAAYFH DEDVCSAPPD  120
VLVRAHIMPA RVPSREAGDG RQFYFFTKAR FIGNKLNNRS RIIKNTGDKE TWHAEGSAKP  180
VDGTADGYMT KLSYHVKTGP KTVEKPGWIM TEYSFKDTKE GDLVLCKVYK SPRGPGRSKA  240
PSSPPAMSDR KRKAADDLEE ATPSTRPRQN NENHQHAAVP EFKAERSQTQ AMPASLDNNS  300
ALEDIDWSWF MPESEAERSQ PHLAKPASSG SNVTLEDIQL YAKLLLADYI RREFPRRKST  360
KRSVDKKPSA SPPVRTCDEV LKPCPRSLKE NPSSRKTSMD DEPAVNEAAS SSAVRFSRSN  420
SSSTCRLFSD EAASYRILIS SNHVRSRRKH GRPSDSEAWY EGYVIVRTRT EGMIDGKILV  480
LWLPAMVVSA TDGSYEVIYE GKLSPNDPFS CVHVPLNHVR PIKRDRPMDP KPAVAEEAHA  540
KIEDSRKPKT SARAESEVGK CKKPLYLRRD HAAETKPAPR PTTAGKSIKV IRKIMSEKGR  600
QDRYY

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6280	15	45