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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc04109.1.g00070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 224aa MW: 24916.4 Da PI: 11.7029 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.1 | 1.4e-10 | 193 | 223 | 2 | 36 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36 +ykGVr+++ +g+Wv+eIr+p + r r +lg++ Zmw_sc04109.1.g00070.1.am.mk 193 KYKGVRRRP-WGKWVSEIRVPGT---RERLWLGSY 223 8********.**********943...5******99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 2.75E-8 | 193 | 223 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 14.776 | 193 | 224 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.2E-4 | 193 | 223 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.0E-13 | 193 | 223 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 0.0016 | 193 | 224 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.93E-12 | 193 | 223 | No hit | No description |
PRINTS | PR00367 | 1.9E-5 | 194 | 205 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.9E-5 | 216 | 224 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence Send to blast |
LWGAGDRRRA SSFCDSASIV ARISYDCAYG FGVFDGAIAA AAQSKPNLED DVKVRHPRSS 60 SLRQNANIQT LGDARASLLS YIVAVVTTSL VGSTRRLDSR HQRGLETVSR RLEWKYGIAA 120 AVRAVLRRAI GGFAEFDRVR QRSFLLRFGP SVRVVVRRPT RQHISCACRT DDAGGEMSRS 180 MASGGAEPRR CNKYKGVRRR PWGKWVSEIR VPGTRERLWL GSYA |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6433 | 29 | 51 |