PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04101.1.g00100.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 568aa    MW: 60147.6 Da    PI: 8.5355
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04101.1.g00100.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.77.8e-31327385259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  Zmw_sc04101.1.g00100.1.am.mk 327 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRQDPNMLVITYTSEHNHP 385
                                   699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081133.029321387IPR003657WRKY domain
Gene3DG3DSA:2.20.25.808.8E-31324387IPR003657WRKY domain
SuperFamilySSF1182904.05E-26325387IPR003657WRKY domain
SMARTSM007741.0E-37326386IPR003657WRKY domain
PfamPF031069.9E-26328385IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 568 aa     Download sequence    Send to blast
MTFYRARQAR AAAMPPCVWR WRASRPHLAS RARPVPGGGH GIHPSIRPSV NRPSAAASLI  60
GSERIIERRA VVAACIHYRA PVDRQRCPSQ RDIAMCDSYF LQRMEGDQAG GGDLTDVVRA  120
GGVVPGNAEV PSTAAEWQLQ GEPMFYPPPP SSSDGCAGST GASVFGDPFS GLGDPFSSDF  180
SSGADFLDAM PDAMAKVGFD TAVGGGGSGC GGGGAQMLDM SRKAPLLPRG VQMPPTVGLL  240
GPRVLPSPLS PRAIRPYPPM GGDMAKLGIT AGQIAGCAID AAVVGTQMSS PRAAGGIKRR  300
KNQARKVVCI PAPTAASGRP TGEVLPSDLW AWRKYGQKPI KGSPYPRGYY RCSSSKGCSA  360
RKQVERSRQD PNMLVITYTS EHNHPWPTQR NALAGSTRNH HGKNGSGSSG SKSSQNEKQK  420
LPNVKEESKD QATTASTINT ATSTSPVPAV KEEALPGSEA LGRTMDATGA ADHNNLTLMD  480
HVFISESYKP MIPEAGQPDD FFFDLAELES DPMSLIFSKD RIEENPAGGD DDRGKDKAII  540
KDLDPFEMLD WSNASSAGSS FEQGNKIG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B8e-24301388280Disease resistance protein RRS1
5w3x_D8e-24301388280Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00171DAPTransfer from AT1G30650Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025825027.10.0probable WRKY transcription factor 35
TrEMBLA0A1E5VDC20.0A0A1E5VDC2_9POAL; Putative WRKY transcription factor 35
STRINGSi011735m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25923888