PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04067.1.g00070.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 328aa MW: 36586.1 Da PI: 4.4714

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04067.1.g00070.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	47	7e-15	152	241	3	98
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfsk 82 fqr ws++De+ +L l + ++g+ p++ d++a + ++++ +ql+ K+++L+ + + vkk g+ sk Zmw_sc04067.1.g00070.1.am.mk 152 FQRSWSKDDEVRILETLAAHRREHGTLPHHkDLEAALA--GSLDNSDYRGNQLLGKVKSLRSVYSRTVKK---GEL--PSK 225 9**********************9776657777543..3344689*******************...544..579 PP DUF573 83 ehdqkifelskkiWgs 98 +hd+ if+lsk +Wgs Zmw_sc04067.1.g00070.1.am.mk 226 DHDRRIFNLSKEVWGS 241 9***********95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	2.7E-19	152	240	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence Send to blast
MAPKRPAPPP PPVESSEETD SGSGSEESEE EIALSPPTAT APKNTVRPPP QPEASDESSS 60 EEEDESGEED EEEEEEALKS NYTVPPTANP NPPPPLPTQE ESESDEEGEE SESEEEANDD 120 APQKESASKL AAEANGEKLP PSSGDNKRGG FFQRSWSKDD EVRILETLAA HRREHGTLPH 180 HKDLEAALAG SLDNSDYRGN QLLGKVKSLR SVYSRTVKKG ELPSKDHDRR IFNLSKEVWG 240 SDNSPADHTV KRNFEEMCKL YPFFSEEAKA LEKTHPGLLK REFGVIDDEK ARVLEQKIKK 300 QRLMQMKVEL RRHDLTKELT KALMDLVQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004954058.2	7e-76	uncharacterized protein LOC101755591
TrEMBL	A0A3L6QKU3	1e-84	A0A3L6QKU3_PANMI; Uncharacterized protein
STRING	Pavir.Aa00346.1.p	8e-83	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6729	27	37