PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04026.1.g00020.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 691aa    MW: 73106.2 Da    PI: 9.1377
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04026.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.31e-30320378259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  Zmw_sc04026.1.g00020.1.am.mk 320 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRQDPNMLVITYTSEHNHP 378
                                   699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.443314380IPR003657WRKY domain
SuperFamilySSF1182906.8E-26318380IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.4E-30318380IPR003657WRKY domain
SMARTSM007741.0E-37319379IPR003657WRKY domain
PfamPF031061.3E-25321378IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 691 aa     Download sequence    Send to blast
MHGFLPRATS ACRGHAALRM EVAHRPASRP HLASRARPVP GGDHGIHPSV GPSVRPLVNR  60
PSAAARLAST TEPPVDRQRC PSQRNIAMCD SYFLQRMEGD QAGGGDLTDV VRASGVVPGN  120
AEVPSTAAEW QLQGEPMFYP PPASSSDGCA GSTGASVFGD PFSGLGDPFS SDFSSGADFL  180
DAMPDAMAKV GFDTAVGGGG SGCGGGGAQM LDMSRKAPLL PRGVQMPPTV GLLGPRVLPS  240
PLSPRAIRPY PPMGGDMVKL GITAGQIAGC AIDAAVVGMQ MSSPRAAGGI KRRKNQARKV  300
VCIPAPTAAS GRPTGEVAPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CSARKQVERS  360
RQDPNMLVIT YTSEHNHPWP TQRNALAGST RNHHGKNGSG SSGSKSSQNE KQKLPNVKEE  420
SKDQATTAST INTATSTSPV PAVKEEALPG SEALGRTMDA TGAADHNNLT LMDHVFISES  480
YKPMIPEAGQ PDDFFFDLAE LESDPMSLIF SKDRIEENPA GGDDDRGKDK AIIKDLDPFE  540
MLDWTDEHVH VPSGTTDTPA RSLASTAAPS RAVGDVRSHR SCAAHARAGL CRQITRPHAT  600
RYVLDPVRER TAATTTGGRG EDWVVKRPII RHSSAGAHPV RPPEHRAHSG ATVVGRSANC  660
SEQPGVRAPA LLLFRAPAPG RLIDRRGDRI E
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B9e-24294381280Disease resistance protein RRS1
5w3x_D9e-24294381280Disease resistance protein RRS1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025825027.10.0probable WRKY transcription factor 35
TrEMBLA0A1E5VDC20.0A0A1E5VDC2_9POAL; Putative WRKY transcription factor 35
STRINGSi011735m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25923888