PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 475aa MW: 52367.8 Da PI: 7.2539

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03937.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.3	1.9e-24	140	189	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k +++WtpeLH+rFv+aveqL G++kA+P++ile+m+++gLt+++++SHLQ Zmw_sc03937.1.g00050.1.am.mk 140 KRKVNWTPELHRRFVQAVEQL-GIDKAVPSRILEIMGIEGLTRHNIASHLQ 189 5799***************.*************************** PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	13.14	137	196	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.4E-22	138	189	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.27E-14	140	189	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.6E-23	140	190	IPR006447	Myb domain, plants
Pfam	PF00249	2.7E-7	142	189	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence Send to blast
LDVDVGFPTS TDCGGVDEFM AVDGDNLLEY IDFTCCDVVP SFFDADGDIL PDLETELLAE 60 FEDHDDKENE DEKWLLLEEE EDHRKKRSGS SEDEVLLSAA TTEDSAAAAG SSSDTSKSSS 120 VSAEGQISKK KKSSKKSNGK RKVNWTPELH RRFVQAVEQL GIDKAVPSRI LEIMGIEGLT 180 RHNIASHLQV NGVVSIRFVY NIFLGPKRAK RRRQGGGRLH ATRQRMHGPA STSCAQIPIE 240 RYDRMNELYL YIYRKHLMAR EAEAASWAQK RQMYAAAAVG TPRTTKDVMP PAAPRPYWAV 300 PTSSTIGFPP PPFLHVWGHP PTAMEAAVPM LPVWPRHLAP PRPWAPLDPA VFWHQQYNGA 360 RKWGPQAVPQ MPPAAAAAML PRFPAPVPGT MMPHPMYRPR MPPPPQITGS TSQLQLDAHP 420 SKESIDAAIG DVLVKPWLPL PLGLKPPSLD SVMSELHKQG IPKIPPAATA TGRQP

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence Send to blast

LDVDVGFPTS TDCGGVDEFM AVDGDNLLEY IDFTCCDVVP SFFDADGDIL PDLETELLAE  60
FEDHDDKENE DEKWLLLEEE EDHRKKRSGS SEDEVLLSAA TTEDSAAAAG SSSDTSKSSS  120
VSAEGQISKK KKSSKKSNGK RKVNWTPELH RRFVQAVEQL GIDKAVPSRI LEIMGIEGLT  180
RHNIASHLQV NGVVSIRFVY NIFLGPKRAK RRRQGGGRLH ATRQRMHGPA STSCAQIPIE  240
RYDRMNELYL YIYRKHLMAR EAEAASWAQK RQMYAAAAVG TPRTTKDVMP PAAPRPYWAV  300
PTSSTIGFPP PPFLHVWGHP PTAMEAAVPM LPVWPRHLAP PRPWAPLDPA VFWHQQYNGA  360
RKWGPQAVPQ MPPAAAAAML PRFPAPVPGT MMPHPMYRPR MPPPPQITGS TSQLQLDAHP  420
SKESIDAAIG DVLVKPWLPL PLGLKPPSLD SVMSELHKQG IPKIPPAATA TGRQP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	211	PKRAKRR

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcriptional activator that promotes chloroplast development. Acts as an activator of nuclear photosynthetic genes involved in chlorophyll biosynthesis, light harvesting, and electron transport (By similarity). {ECO:0000250}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By light. {ECO:0000269\|PubMed:11340194}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008673438.1	2e-98	golden plant 2 isoform X1
Swissprot	Q5NAN5	5e-64	GLK2_ORYSJ; Probable transcription factor GLK2
TrEMBL	A0A1D6MES1	4e-97	A0A1D6MES1_MAIZE; Golden plant2
STRING	GRMZM2G087804_P03	2e-96	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2415	38	86

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]