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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03904.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | Dof | ||||||||
Protein Properties | Length: 316aa MW: 34677.6 Da PI: 11.2288 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 111.1 | 5.2e-35 | 254 | 308 | 6 | 60 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +cprC s++tkfCyynny+++qPr+fC+aCrryWt GG+lrnvPvGg++rk+ + Zmw_sc03904.1.g00010.1.am.mk 254 EQCPRCASRDTKFCYYNNYNTAQPRHFCRACRRYWTLGGSLRNVPVGGSTRKRPR 308 68*************************************************9865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02701 | 2.4E-30 | 254 | 306 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 27.615 | 254 | 308 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 6.0E-22 | 255 | 301 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 256 | 292 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence Send to blast |
MHARRIAFEL LQQSTSGLSG LSLKATKELA AGRALHAERI SPAGRPASVR PRRRMEILSL 60 SGGAPETRYA PIPAAERGSF DPSRIVFGVT TRRSRQLFVS STYTRKQRNA PSTSSDWSRP 120 CLSLLSPALY LPPPYESTGC RADEQSLSRE RDKRLCDTAP ASSSSAIQQL AVYIRNLLAQ 180 EPTTSAMEAP LYHLPVPIPA PGVPALPATL RQHDATIGAV IHQQQQHQAA AVITAQKKPP 240 PPTPPPTVMA TGREQCPRCA SRDTKFCYYN NYNTAQPRHF CRACRRYWTL GGSLRNVPVG 300 GSTRKRPRPA RPTRAL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 304 | 308 | KRPRP |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP140 | 37 | 367 |