PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03904.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Dof
Protein Properties Length: 316aa    MW: 34677.6 Da    PI: 11.2288
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03904.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof111.15.2e-35254308660
                        zf-Dof   6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 
                                    +cprC s++tkfCyynny+++qPr+fC+aCrryWt GG+lrnvPvGg++rk+ +
  Zmw_sc03904.1.g00010.1.am.mk 254 EQCPRCASRDTKFCYYNNYNTAQPRHFCRACRRYWTLGGSLRNVPVGGSTRKRPR 308
                                   68*************************************************9865 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027012.4E-30254306IPR003851Zinc finger, Dof-type
PROSITE profilePS5088427.615254308IPR003851Zinc finger, Dof-type
ProDomPD0074786.0E-22255301IPR003851Zinc finger, Dof-type
PROSITE patternPS013610256292IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MHARRIAFEL LQQSTSGLSG LSLKATKELA AGRALHAERI SPAGRPASVR PRRRMEILSL  60
SGGAPETRYA PIPAAERGSF DPSRIVFGVT TRRSRQLFVS STYTRKQRNA PSTSSDWSRP  120
CLSLLSPALY LPPPYESTGC RADEQSLSRE RDKRLCDTAP ASSSSAIQQL AVYIRNLLAQ  180
EPTTSAMEAP LYHLPVPIPA PGVPALPATL RQHDATIGAV IHQQQQHQAA AVITAQKKPP  240
PPTPPPTVMA TGREQCPRCA SRDTKFCYYN NYNTAQPRHF CRACRRYWTL GGSLRNVPVG  300
GSTRKRPRPA RPTRAL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1304308KRPRP
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP14037367