PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03883.1.g00120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 311aa MW: 33981.9 Da PI: 4.2881 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61 | 2.7e-19 | 132 | 183 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g++vAeIrdp+ + r++lg+++ + +Aa+a+++a+ +++g+ Zmw_sc03883.1.g00120.1.am.mk 132 KYRGVRQRP-WGKYVAEIRDPK----CrgSRVWLGTYDVPIDAARAYDRAAFRMRGA 183 8********.**********83....335**************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 1.2E-31 | 131 | 191 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.734 | 132 | 190 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.2E-13 | 132 | 182 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.45E-18 | 132 | 191 | No hit | No description |
SuperFamily | SSF54171 | 1.63E-21 | 132 | 191 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 5.7E-36 | 132 | 196 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.5E-13 | 133 | 144 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.5E-13 | 172 | 192 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence Send to blast |
MDFTGDADYF FDLDFIREHL LGSDNGVPMT SWVVSDDSSF PVLPPPAAEP AFQHVPFLQQ 60 QQQQPEWYMD MAHDYTNAAP APAAAGEEAC GAQEPVQPVM LMFESDPLSP AISYASPAAT 120 EAAPVPIEDF RKYRGVRQRP WGKYVAEIRD PKCRGSRVWL GTYDVPIDAA RAYDRAAFRM 180 RGAKAILNFP NEVGTRGADL LAASAPAPAK KRRTRQEDPD VEVIAVVSKA AEIVEVPSWT 240 STPVSSASSP SSTSTFETLE IVASTVTSAA SMTASDGAEW AFPETPSSWS WEQSWEELLR 300 GLPPLSPHPE F |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 6e-25 | 131 | 195 | 4 | 68 | ATERF1 |
3gcc_A | 6e-25 | 131 | 195 | 4 | 68 | ATERF1 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020178351.1 | 2e-79 | ethylene-responsive transcription factor ERF105-like | ||||
TrEMBL | A0A3B6CB95 | 1e-79 | A0A3B6CB95_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A446MLS7 | 1e-79 | A0A446MLS7_TRITD; Uncharacterized protein | ||||
STRING | Traes_2BL_859E9B1DA.2 | 8e-80 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP103 | 37 | 465 |