PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03724.1.g00060.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 662aa MW: 72694 Da PI: 10.2042

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03724.1.g00060.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	43.9	6.4e-14	280	347	3	69
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkv 69 +q+ ws+ De +lL + +df+++tg p d+ +++e + +sis ++++ + K++rLK Kf++ Zmw_sc03724.1.g00060.1.am.mk 280 AQKHWSDADEFTLLNAALDFRKRTGRVPRLpDMAKLFESITDSISPEINQWMVYYKLKRLKSKFQHTD 347 6899********************77766*******************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	6.7E-12	281	347	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence Send to blast
MSAGAPRRRR RRRGRPPTRY NDGGAADLGL GFRLEQPRRP SLFFLPRVLF PREFSRPEFF 60 AWVSDPVGRQ DGGGSVGWLG DQRRDTPGFH NPTSRVHATK SQSARRCPSP RHAERTPQPS 120 PRHAAPMSTE RSAASAMDAD AEPSPPSPPR SKKPASRTGD GQSSPNPSPG GSPAGRSDQK 180 RRRLRTSAES AALALASVAA HASAANVDAD ANRAAAKRRG PAGVRVDEGH GAIQMLGAAA 240 ARVDRGQTDV QKHGPAEGPV TRGRAAGHKP GTAYASRGAA QKHWSDADEF TLLNAALDFR 300 KRTGRVPRLP DMAKLFESIT DSISPEINQW MVYYKLKRLK SKFQHTDDPS DRRLRDLCAD 360 LWGLVPPNDI SDGETDSDER RAAPDAAAMM PVVAEVLGEY WRMNARAMER VPLEKGLSRL 420 GKKQGRLMET KWRQQLDEEM QTQMRRHDLA KEHDLCAGVW GRRRRGAPPG RPPTTTAPYR 480 RPDEDLDGED EEAGEQDAEE GRLIADEGES DAGELRLATE RPTNPAPLPH FDANLLSEAR 540 GTTRVVHRHT DAVPTLPSPS RLMKRWLCGN RHVDGEQDHV QSHGTADVRT GVGDGTAQTL 600 ERETTVPPTI FRRSGATPTR GSISPHIDEA MACYKLCRIS SMFRHDPPGG EYATARDHSH 660 TL

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence Send to blast

MSAGAPRRRR RRRGRPPTRY NDGGAADLGL GFRLEQPRRP SLFFLPRVLF PREFSRPEFF  60
AWVSDPVGRQ DGGGSVGWLG DQRRDTPGFH NPTSRVHATK SQSARRCPSP RHAERTPQPS  120
PRHAAPMSTE RSAASAMDAD AEPSPPSPPR SKKPASRTGD GQSSPNPSPG GSPAGRSDQK  180
RRRLRTSAES AALALASVAA HASAANVDAD ANRAAAKRRG PAGVRVDEGH GAIQMLGAAA  240
ARVDRGQTDV QKHGPAEGPV TRGRAAGHKP GTAYASRGAA QKHWSDADEF TLLNAALDFR  300
KRTGRVPRLP DMAKLFESIT DSISPEINQW MVYYKLKRLK SKFQHTDDPS DRRLRDLCAD  360
LWGLVPPNDI SDGETDSDER RAAPDAAAMM PVVAEVLGEY WRMNARAMER VPLEKGLSRL  420
GKKQGRLMET KWRQQLDEEM QTQMRRHDLA KEHDLCAGVW GRRRRGAPPG RPPTTTAPYR  480
RPDEDLDGED EEAGEQDAEE GRLIADEGES DAGELRLATE RPTNPAPLPH FDANLLSEAR  540
GTTRVVHRHT DAVPTLPSPS RLMKRWLCGN RHVDGEQDHV QSHGTADVRT GVGDGTAQTL  600
ERETTVPPTI FRRSGATPTR GSISPHIDEA MACYKLCRIS SMFRHDPPGG EYATARDHSH  660
TL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	6	12	RRRRRRR
2	7	14	RRRRRRGR
3	179	183	KRRRL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004954046.2	1e-100	uncharacterized protein LOC101785158
TrEMBL	A0A0A8YJH9	1e-106	A0A0A8YJH9_ARUDO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2682	27	63