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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zmw_sc03678.1.g00050.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
B3 |
Protein Properties |
Length: 298aa MW: 32095.3 Da PI: 9.9903 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc03678.1.g00050.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 100.8 | 8.1e-32 | 119 | 218 | 1 | 92 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT- CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangL 74
f+k+ tpsdv+k++rlv+pk++ae+h g + +++ l +ed +g++W+++++y+++s++yvltkGW++Fvk++gL
Zmw_sc03678.1.g00050.1.sm.mk 119 FDKTVTPSDVGKLNRLVIPKQHAEKHfplelpsAGGESKGVLLNFEDAEGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGL 199
89*******************************5556799***************************************** PP
-TT-EEEEEE-SS.SEE.. CS
B3 75 kegDfvvFkldgr.sefel 92
++gD+v F+++ +++l
Zmw_sc03678.1.g00050.1.sm.mk 200 NAGDVVGFYRTAAgPDTKL 218
*********7655455555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MDSASSLRVW LGTFAGEGDA ARAYDVAAQR FRGRDAVTNF RPLADADPDA AAELRFLASR 60 SKAEVVDMLR KHTYFDELAQ NRRAFASAPT TFSSLAANNH DSSSSSPSPA SAAAREHLFD 120 KTVTPSDVGK LNRLVIPKQH AEKHFPLELP SAGGESKGVL LNFEDAEGKV WRFRYSYWNS 180 SQSYVLTKGW SRFVKEKGLN AGDVVGFYRT AAGPDTKLFI ECKLRPKNGA AVSVAANPVI 240 NVASSAPVTK AVRLFGVDLL TAPAPEAAMG TGCKRARDFA ATPTQAAFKK PLVELALV
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 2e-52 | 113 | 229 | 2 | 117 | B3 domain-containing transcription factor NGA1 |
5os9_B | 2e-52 | 113 | 229 | 2 | 117 | B3 domain-containing transcription factor NGA1 |
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