PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03676.1.g00030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Trihelix
Protein Properties Length: 480aa    MW: 51512.7 Da    PI: 4.4752
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03676.1.g00030.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.61.9e-09175253170
                      trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.........rergferspkqCkekwenlnkrykkikegekk 70 
                                   +Wt  e+laL++ +  +++  +r+ ++ ++W+ v++++          +r  +r + +C+ +we l+ +y +++++e +
  Zmw_sc03676.1.g00030.1.am.mk 175 EWTPAETLALVAEVAAVDDGWSRSVSAFQKWAMVAENLaasesfasgLARRGKRAAGECRRRWEALEADYGAVRRWEVR 253
                                   5******************************************9999888889***********************976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.62176241IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009506Cellular Componentplasmodesma
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MDAATRDRDL AGVVHSRQPR DRVGITTPPS AYQRCRGPTR MVEATGEGRS KGPDLAGLHQ  60
SASKATAVSG RRPAARCSST RGPTASLAGS PSRSTTNKIS ELTHHFISLE LTRASSSLPH  120
RLTPLSRSMD PPTDDDPPCI IQALRASSST VPAPPLVQAL PALHPRRTRS GGAPEWTPAE  180
TLALVAEVAA VDDGWSRSVS AFQKWAMVAE NLAASESFAS GLARRGKRAA GECRRRWEAL  240
EADYGAVRRW EVRTGLRYRE MSVAARRKAG LPAEFDAEVF GAMDALIRVE EALLANAAGG  300
GGGAGEEVEG LVGGSAVVEV GEEDTGVPEI GEDEVKEDEL VHEAQEDESA NEIEDEDGRE  360
DDKEMQPDNG NADTSNSFEE GCEAEAVETN SKTENSENIV WELANKLQEN AQHIHTILND  420
EANECGNENH ALAYSMSPDA METTRQKADE LIKSLGGLLG YLNQFTELIE ESGFENVGMT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012701598.11e-133trihelix transcription factor ASR3
TrEMBLA0A368PHJ71e-132A0A368PHJ7_SETIT; Uncharacterized protein
STRINGSb04g004960.11e-126(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63532433