PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03676.1.g00030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | Trihelix | ||||||||
Protein Properties | Length: 480aa MW: 51512.7 Da PI: 4.4752 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 29.6 | 1.9e-09 | 175 | 253 | 1 | 70 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.........rergferspkqCkekwenlnkrykkikegekk 70 +Wt e+laL++ + +++ +r+ ++ ++W+ v++++ +r +r + +C+ +we l+ +y +++++e + Zmw_sc03676.1.g00030.1.am.mk 175 EWTPAETLALVAEVAAVDDGWSRSVSAFQKWAMVAENLaasesfasgLARRGKRAAGECRRRWEALEADYGAVRRWEVR 253 5******************************************9999888889***********************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50090 | 6.62 | 176 | 241 | IPR017877 | Myb-like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009506 | Cellular Component | plasmodesma |
Sequence ? help Back to Top |
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Protein Sequence Length: 480 aa Download sequence Send to blast |
MDAATRDRDL AGVVHSRQPR DRVGITTPPS AYQRCRGPTR MVEATGEGRS KGPDLAGLHQ 60 SASKATAVSG RRPAARCSST RGPTASLAGS PSRSTTNKIS ELTHHFISLE LTRASSSLPH 120 RLTPLSRSMD PPTDDDPPCI IQALRASSST VPAPPLVQAL PALHPRRTRS GGAPEWTPAE 180 TLALVAEVAA VDDGWSRSVS AFQKWAMVAE NLAASESFAS GLARRGKRAA GECRRRWEAL 240 EADYGAVRRW EVRTGLRYRE MSVAARRKAG LPAEFDAEVF GAMDALIRVE EALLANAAGG 300 GGGAGEEVEG LVGGSAVVEV GEEDTGVPEI GEDEVKEDEL VHEAQEDESA NEIEDEDGRE 360 DDKEMQPDNG NADTSNSFEE GCEAEAVETN SKTENSENIV WELANKLQEN AQHIHTILND 420 EANECGNENH ALAYSMSPDA METTRQKADE LIKSLGGLLG YLNQFTELIE ESGFENVGMT |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012701598.1 | 1e-133 | trihelix transcription factor ASR3 | ||||
TrEMBL | A0A368PHJ7 | 1e-132 | A0A368PHJ7_SETIT; Uncharacterized protein | ||||
STRING | Sb04g004960.1 | 1e-126 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6353 | 24 | 33 |