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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zmw_sc03643.1.g00090.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
MYB |
Protein Properties |
Length: 251aa MW: 27982.9 Da PI: 5.0406 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc03643.1.g00090.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 47.1 | 5.6e-15 | 5 | 52 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd +lv v+++G ++W+ a+ g++Rt+k+c++rw +yl
Zmw_sc03643.1.g00090.1.sm.mk 5 KGSWTEEEDAQLVWFVRLFGERRWDFLAKVSGLKRTGKSCRLRWVNYL 52
799*******************************************97 PP
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2 | Myb_DNA-binding | 51.5 | 2.3e-16 | 58 | 101 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rgr T++E+ l+v++++++G++ W++Iar ++ gRt++++k++w++
Zmw_sc03643.1.g00090.1.sm.mk 58 RGRITADEERLIVELHAKWGSR-WSRIARSLP-GRTDNEIKNFWRT 101
899*******************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MTMRKGSWTE EEDAQLVWFV RLFGERRWDF LAKVSGLKRT GKSCRLRWVN YLHPDLRRGR 60 ITADEERLIV ELHAKWGSRW SRIARSLPGR TDNEIKNFWR TRMRKQKALG DQRQCKDDRS 120 TTTVAAASPS SSSVTTAFFS GGSPNSGGTA TSSSTVTESA QQGGSGEDDD EAELDEASTL 180 TTASQHQQEC CYTMDQLWNE IAAAEAAASY SMVDGWGIGH AAAPAEPASM PSPVWEFCSD 240 YSLWMIDDEG Y
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1gv2_A | 4e-26 | 5 | 106 | 4 | 104 | MYB PROTO-ONCOGENE PROTEIN |
1h88_C | 2e-25 | 5 | 106 | 58 | 158 | MYB PROTO-ONCOGENE PROTEIN |
1h89_C | 2e-25 | 5 | 106 | 58 | 158 | MYB PROTO-ONCOGENE PROTEIN |
1mse_C | 5e-26 | 5 | 106 | 4 | 104 | C-Myb DNA-Binding Domain |
1msf_C | 5e-26 | 5 | 106 | 4 | 104 | C-Myb DNA-Binding Domain |
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