PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03443.1.g00080.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 585aa    MW: 62646.9 Da    PI: 7.6734
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03443.1.g00080.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.23.9e-29292349359
                                   -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   D ++WrKYGqK++kgs++pr+YYrC++  +C+++k+ver+++dp ++++tY+geH h+
  Zmw_sc03443.1.g00080.1.am.mk 292 DLWAWRKYGQKPIKGSPYPRGYYRCSTDkDCKARKQVERCRDDPGTLIVTYTGEHSHP 349
                                   99***********************9998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.8E-30281351IPR003657WRKY domain
PROSITE profilePS5081131.272285351IPR003657WRKY domain
SuperFamilySSF1182904.71E-26288351IPR003657WRKY domain
SMARTSM007741.2E-35290350IPR003657WRKY domain
PfamPF031061.4E-24292349IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 585 aa     Download sequence    Send to blast
MQRRAASESQ SHPARRCWRR LTGATPRAPR QEPCDPMART EQQLLIPWAY GEKLKSRPDT  60
SVTRRDVRSP GRSTNAKRSP AFRAFLSRIH RPAGPHHNPL PLPPPQPRRQ KQLRLASLRW  120
KSSRSQRLLP ALLSVRPYSE RRELEEPAGE MEGDLGWCRG GGSSSNNWDL HAVVRLACGD  180
AAPSSSVPPS DDADDAFPWP GPLQPLLTDP AVDGLCQALL AAPKQEAAPL SSPRNEAPAT  240
TQQPAPPAEE APAKPLASGR GGGRPTRSKR KSKKSQVNKE VTRVAAGAPS PDLWAWRKYG  300
QKPIKGSPYP RGYYRCSTDK DCKARKQVER CRDDPGTLIV TYTGEHSHPV PLHRSSLAGT  360
TRSKPQQQPS AASPTAEETE SQQAQSPALA SSTAEETQQQ GTPSACTGLS PSTPLRLPSV  420
GVEYEDEEDD DTLAVRLLLE DTEMAAEDDA LLFFQPDEPA PLGVPGSGVG CDDVMLLPKP  480
EEPAPMSGNG SGVCDDAKLF HNNKPDEPAG PPGTVSSGGG AEDVNMLFPK PSEPQGPQRT  540
MVSAGIANVD GGTASVINFV DEKFSVSGRS AWEAAAAAAA SGWGL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-172923511879Disease resistance protein RRS1
5w3x_D2e-172923511879Disease resistance protein RRS1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104111PQPRRQKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025812935.11e-115WRKY transcription factor 22-like
TrEMBLA0A1E5VAE71e-114A0A1E5VAE7_9POAL; WRKY transcription factor 22
STRINGPavir.Da00956.1.p1e-106(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125622536