 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zmw_sc03303.1.g00060.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 276aa MW: 30215.6 Da PI: 4.8783 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zmw_sc03303.1.g00060.1 | genome | ZGD | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 57.5 | 2.2e-18 | 90 | 143 | 4 | 56 |
-SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++ft+eq++ Le+ F+ ++ +e++eLA++lgL+ rqV +WFqN+Ra+++
Zmw_sc03303.1.g00060.1.am.mkhc 90 KRRFTEEQVRSLETTFHArRAKLEPKEKAELARELGLQPRQVAIWFQNKRARWR 143
458**************8899********************************9 PP
|
| 2 | HD-ZIP_I/II | 119.1 | 2.3e-38 | 88 | 181 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeene 78
e+krr+++eqv++LE++F++++ kLep++K+elareLglqprqva+WFqn+RAR+++kqlE+dy+ L+++ydal++ e
Zmw_sc03303.1.g00060.1.am.mkhc 88 ERKRRFTEEQVRSLETTFHARRaKLEPKEKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDYADLRARYDALRDLVE 166
69*****************9999******************************************************** PP
HD-ZIP_I/II 79 rLekeveeLreelke 93
+L++e+ +L+++l+e
Zmw_sc03303.1.g00060.1.am.mkhc 167 SLKQEKVALAAQLDE 181
**********99976 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 276 aa
Download sequence Send
to blast |
MRAVIDPAPE TGRCAAPGGR GEASLALAPQ LIDSCGPGIE AMERDCQFLV PPPPQHQHED 60
QLLHQLMMVG DQDPVGAAGM RGGGGGGERK RRFTEEQVRS LETTFHARRA KLEPKEKAEL 120
ARELGLQPRQ VAIWFQNKRA RWRSKQLEHD YADLRARYDA LRDLVESLKQ EKVALAAQLD 180
ELKGRLNERQ DQSGGSCNIT GGTASFDVDD KRNNNSSVSS QDDGAMAPAV ATSEDSTAAG 240
YYDDHAVAYG GGLPDPFCNP PELWDTWPLL EWNAVA
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
