|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zmw_sc03291.1.g00110.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
Family |
MYB |
Protein Properties |
Length: 265aa MW: 29062.5 Da PI: 5.7347 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc03291.1.g00110.1 | genome | ZGD | - |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 60.9 | 2.7e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+W++eEd++lv +++q+G ++W++ ++ g+ R++k+c++rw +yl
Zmw_sc03291.1.g00110.1.sm.mkhc 14 RGAWSPEEDQRLVAYIQQHGHPNWRALPKQAGLLRCGKSCRLRWINYL 61
89******************************99************97 PP
|
2 | Myb_DNA-binding | 53.1 | 7.1e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+++++E+el+++++++lG++ W++Ia+ ++ gRt++++k+ w+++l
Zmw_sc03291.1.g00110.1.sm.mkhc 67 RGNFSADEEELIIRLHQELGNR-WSAIAAQLP-GRTDNEIKNVWHTHL 112
89********************.*********.************986 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MGRAPCCAKE GLRRGAWSPE EDQRLVAYIQ QHGHPNWRAL PKQAGLLRCG KSCRLRWINY 60 LRPDIKRGNF SADEEELIIR LHQELGNRWS AIAAQLPGRT DNEIKNVWHT HLKKRLQDAG 120 SGGRKKKQAR KSKTAKKATQ EATADVDGDE PLQFTVASPE LSSSVSSGVT CSTATESTAA 180 ASSADNAATT SASQVALKAE TESFSTAEFP PIDESFWASS DAMDMDLGAM DEELGLASSA 240 ATRDEDMEFW KMLLESGDMR DLTVM
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 112 | 126 | KKRLQDAGSGGRKKK |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional activator involved in cold stress response (PubMed:14675437, PubMed:20807373, PubMed:22246661). Regulates positively the expression of genes involved in reactive oxygen species (ROS) scavenging such as peroxidase and superoxide dismutase during cold stress. Transactivates a complex gene network that have major effects on stress tolerance and panicle development (PubMed:20807373). {ECO:0000269|PubMed:14675437, ECO:0000269|PubMed:20807373, ECO:0000269|PubMed:22246661}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: By cold stress. {ECO:0000269|PubMed:14675437, ECO:0000269|PubMed:20807373, ECO:0000269|Ref.2}. |