PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03255.1.g00080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 1091aa MW: 116657 Da PI: 6.5555 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.2 | 2.3e-14 | 936 | 978 | 9 | 55 |
AP2 9 dkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++ +gr++AeIr+ + r +r++lg+f+t++ Aa+a++aa+++l+g Zmw_sc03255.1.g00080.1.am.mk 936 RP-WGRYAAEIRHpV-----RkARVWLGTFDTPKAAARAYDAAARRLRG 978 45.**********44.....55**************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF08263 | 9.2E-7 | 26 | 68 | IPR013210 | Leucine-rich repeat-containing N-terminal, plant-type |
Gene3D | G3DSA:3.80.10.10 | 3.8E-35 | 28 | 206 | IPR032675 | Leucine-rich repeat domain, L domain-like |
SuperFamily | SSF52058 | 1.19E-40 | 60 | 301 | IPR032675 | Leucine-rich repeat domain, L domain-like |
Pfam | PF13855 | 3.6E-7 | 72 | 129 | IPR001611 | Leucine-rich repeat |
SMART | SM00369 | 210 | 94 | 118 | IPR003591 | Leucine-rich repeat, typical subtype |
SMART | SM00369 | 350 | 140 | 163 | IPR003591 | Leucine-rich repeat, typical subtype |
Pfam | PF13855 | 5.7E-7 | 142 | 201 | IPR001611 | Leucine-rich repeat |
SMART | SM00369 | 250 | 165 | 188 | IPR003591 | Leucine-rich repeat, typical subtype |
Gene3D | G3DSA:3.80.10.10 | 4.1E-25 | 214 | 359 | IPR032675 | Leucine-rich repeat domain, L domain-like |
SuperFamily | SSF52058 | 2.72E-54 | 220 | 492 | IPR032675 | Leucine-rich repeat domain, L domain-like |
Pfam | PF13516 | 1.5 | 306 | 323 | IPR001611 | Leucine-rich repeat |
SMART | SM00369 | 41 | 356 | 379 | IPR003591 | Leucine-rich repeat, typical subtype |
Gene3D | G3DSA:3.80.10.10 | 1.3E-57 | 360 | 479 | IPR032675 | Leucine-rich repeat domain, L domain-like |
SMART | SM00369 | 370 | 404 | 427 | IPR003591 | Leucine-rich repeat, typical subtype |
Pfam | PF00560 | 0.36 | 406 | 428 | IPR001611 | Leucine-rich repeat |
SMART | SM00369 | 23 | 428 | 452 | IPR003591 | Leucine-rich repeat, typical subtype |
Gene3D | G3DSA:3.80.10.10 | 1.3E-57 | 552 | 681 | IPR032675 | Leucine-rich repeat domain, L domain-like |
SuperFamily | SSF52058 | 8.84E-18 | 554 | 672 | IPR032675 | Leucine-rich repeat domain, L domain-like |
SMART | SM00369 | 18 | 573 | 597 | IPR003591 | Leucine-rich repeat, typical subtype |
SMART | SM00369 | 160 | 620 | 644 | IPR003591 | Leucine-rich repeat, typical subtype |
CDD | cd00018 | 4.23E-11 | 920 | 988 | No hit | No description |
SMART | SM00380 | 2.0E-21 | 921 | 992 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.733 | 921 | 986 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 7.3E-24 | 935 | 987 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.84E-16 | 935 | 987 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 8.6E-8 | 936 | 978 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005739 | Cellular Component | mitochondrion | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1091 aa Download sequence Send to blast |
MSVLYKVLNL ICGALIIAAP AIQGHSDMQV LLQLKKFLQA QNPLNRGAYD GWSESDAVPC 60 RWAGVGCDSA GRVRSLDLSS SNISGPSFGN FSLLPRLAHL DLSANSINGP LQDDLRRCER 120 LRYLNLTKNF FSGVLDVSSL TKLHVLDVSQ NRFQERIDVN FPAICGNLTY LSVSGNNLSG 180 DVDGLFDGCP RLRYVDISWN SFSGSVLLGA TRFTHFIANN NNFTGTVSRS MFSTGCKLQT 240 LNIGSNYLFG EFPGSVANCT ALKFLSLWDN GFRGAIPSGI GSITGLEVLV LGSNRFDADI 300 PLELKNCSRL KYIDISDNGF GGEVQPVIGE LKSLKSIVLR ENNYTGGIDS SGILQLPNLT 360 MLDLGYNSFS GELPSNFSRT ASITVIMLPE NDFSGPIPPD YGLFVRLQIL DVSYNSLSGR 420 IPPEIGNLKS LLLLMLDGNQ LSGQIPKEIG NCTSLLWLNI AENLLSGEIP PEIASMGSNP 480 DPTFMENRRN QGEPLEPITN NCEGVSQWVP ASYPEFDFVN LLMKTPKNCR AEWIRLQSGY 540 HTVPMSSYDP AFGYVVLSGN LLSGEIPATI GAMSNLKLLL FDRNQLSRNL PPEIGQLPLD 600 GLNISYNSFS GNIPSEIGYM DSLGSLDLSW NNFSGPLPAS LNQLTRLTRF NVSYNPLLSG 660 NISTTGQLST FDENSFLGDP LLSPSSSISN LTPSESSSCG TEKREEIVVS GVAFLAFMLI 720 TFVVRELHYF IYLVKGGSGV GAGTPARQGL KVALGSNAGG QYGGGAKAEA TRGAGMDSRG 780 GVELDDSRLC SAEVSRQPGH VGDQQHRPLP ASQPNAGVPA APPAHGAAPA RHACAPRKNT 840 HPHLVNGQTT SPSPTHLAVC NTSARSAELP RKHVHQPIDP AQLPSYRSSS TAGTFVNRPM 900 APRRPTSPAG SGSGAAGEPP KLRGVXXXXX XXXXXRPWGR YAAEIRHPVR KARVWLGTFD 960 TPKAAARAYD AAARRLRGPR AATNYPDAAL PTPATSVSGS STTELLDESS CSALAAPPSL 1020 DLSLGLPTTP ACMYLDQEKA APALVHFLPL KGEEARSDGS GSSTSSSSVV DEPALSLGLD 1080 INLTWPIEAV A |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4mna_A | 4e-63 | 44 | 679 | 37 | 635 | LRR receptor-like serine/threonine-protein kinase FLS2 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015648807.1 | 0.0 | probable LRR receptor-like serine/threonine-protein kinase At1g74360 | ||||
TrEMBL | A0A0E0E3I2 | 0.0 | A0A0E0E3I2_9ORYZ; Uncharacterized protein | ||||
STRING | LPERR08G08960.1 | 0.0 | (Leersia perrieri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2128 | 2 | 2 |