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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zmw_sc03251.1.g00100.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
B3 |
Protein Properties |
Length: 275aa MW: 30229 Da PI: 10.5227 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc03251.1.g00100.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 100.1 | 1.3e-31 | 32 | 136 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkeg 77
f+kv tpsdv+k++rlv+pk++ae++ + +e++ l++ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++g
Zmw_sc03251.1.g00100.1.am.mk 32 FDKVVTPSDVGKLNRLVIPKQHAEKYfplgSAANEKGLLLSFEDRTGKPWRFRYSYWNSSQSYVITKGWSRFVKEKRLDAG 112
89***************************955556888******************************************* PP
-EEEEEE-.SS.SEE..EEEEE-S CS
B3 78 DfvvFkld.gr.sefelvvkvfrk 99
D+v F + g+ +++l++ ++r+
Zmw_sc03251.1.g00100.1.am.mk 113 DTVSFGRGvGEhARGRLFIDWRRR 136
******6558889999***99997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MTTELTAGPI RSGGGGGGGD DAAVAVEKEH MFDKVVTPSD VGKLNRLVIP KQHAEKYFPL 60 GSAANEKGLL LSFEDRTGKP WRFRYSYWNS SQSYVITKGW SRFVKEKRLD AGDTVSFGRG 120 VGEHARGRLF IDWRRRPEPP APYYHHRLAI PSSLPFAPWA RAHYPAGIGG AGRTVLHLPP 180 SPSSLYDSHR RRHDVYTPST RQVLLYRPHQ QQQATVVQES GLVRTPTSTP GQAEPPSVES 240 SGSKRLRLFG VNLDCAAGSE EGKGKGRRSA PPQPP
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 7e-63 | 27 | 138 | 3 | 115 | B3 domain-containing transcription factor NGA1 |
5os9_B | 7e-63 | 27 | 138 | 3 | 115 | B3 domain-containing transcription factor NGA1 |
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